RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PEF1Q9UBV8 284 aaKnown RBP8.01□□□□□ -1.13
SHMT2-215ENST00000554656 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
SHMT2-215ENST00000554656 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 CGB1A6NKQ9 187 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 BMPR1BO00238 502 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 PRH1P02810 166 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 IFNA4P05014 189 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 EDN2P20800 178 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 ATP6V0CP27449 155 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 BLOC1S1P78537 153 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 C10orf55Q5SWW7 151 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 SLC25A24Q6NUK1 477 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 DPPA3Q6W0C5 159 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 HSD17B11Q8NBQ5 300 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 OR1L6Q8NGR2 347 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
SHMT2-215ENST00000554656 TMEM170AQ8WVE7 144 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 CACNG8Q8WXS5 425 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 SPATA25Q9BR10 227 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 WDR61Q9GZS3 305 aaKnown RBP8□□□□□ -1.13
SHMT2-215ENST00000554656 SIGLEC8Q9NYZ4 499 aa8□□□□□ -1.13
SHMT2-215ENST00000554656 CORTO00230 105 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 MYOD1P15172 320 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 GPX4P36969 197 aaPredicted RBP7.99□□□□□ -1.13
SHMT2-215ENST00000554656 RHOGP84095 191 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 WT1-ASQ06250 92 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 C19orf35Q6ZS72 473 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 SRSF12Q8WXF0 261 aaKnown RBP7.99□□□□□ -1.13
SHMT2-215ENST00000554656 TMEM68Q96MH6 324 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 NPVFQ9HCQ7 196 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 WDR83OSQ9Y284 106 aa7.99□□□□□ -1.13
SHMT2-215ENST00000554656 TRBV9A0A0B4J1U6 114 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 A0A1B0GW64 132 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 E7EUB6 86 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 C17orf112F2Z3M2 114 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 OR13C7P0DN81 318 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 RPEL1Q2QD12 228 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 ETFRF1Q6IPR1 90 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 LCN12Q6JVE5 192 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 LINC00322Q6ZN03 302 aaPredicted RBP7.98□□□□□ -1.13
SHMT2-215ENST00000554656 OR10W1Q8NGF6 305 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 OR1P1Q8NH06 330 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 USMG5Q96IX5 58 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 FAM110AQ9BQ89 295 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 WFDC10AQ9H1F0 79 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 PFDN2Q9UHV9 154 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 DMRT1Q9Y5R6 373 aa7.98□□□□□ -1.13
SHMT2-215ENST00000554656 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.97□□□□□ -1.13
SHMT2-215ENST00000554656 UBE2L5PA0A1B0GUS4 154 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 ZNF785A8K8V0 405 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 MBP02144 154 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 FGF7P21781 194 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 CD300EQ496F6 205 aaPredicted RBP7.97□□□□□ -1.13
SHMT2-215ENST00000554656 FAM74A1Q5RGS3 127 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 TMEM144Q7Z5S9 345 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 ZNF709Q8N972 641 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 TUBA4BQ9H853 241 aa7.97□□□□□ -1.13
SHMT2-215ENST00000554656 F11RQ9Y624 299 aaKnown RBP7.97□□□□□ -1.13
SHMT2-215ENST00000554656 RBMY1BA6NDE4 496 aaKnown RBP7.96□□□□□ -1.14
SHMT2-215ENST00000554656 RBMY1EA6NEQ0 496 aaKnown RBP7.96□□□□□ -1.14
SHMT2-215ENST00000554656 FAM223BA6NKX1 122 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 ZNF705EA8MWA4 302 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-215ENST00000554656 PPP5D1E7EU14 171 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 CYB5BO43169 146 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 ATP6V1G1O75348 118 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 CRYGCP07315 174 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 CD7P09564 240 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 RBMY1DP0C7P1 496 aaKnown RBP7.96□□□□□ -1.14
SHMT2-215ENST00000554656 CTRB1P17538 263 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 S100A1P23297 94 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 RAB31Q13636 194 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 KLK9Q2XQG4 91 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 AKR1C8PQ5T2L2 129 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 CTRB2Q6GPI1 263 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 BTNL8Q6UX41 500 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 GTSCR1Q86UQ5 136 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 FAM223AQ8IWN6 122 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 EIF4E3Q8N5X7 224 aaKnown RBP7.96□□□□□ -1.14
SHMT2-215ENST00000554656 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 SLC35E1Q96K37 410 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 SH3BGRL3Q9H299 93 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 PLA2G2EQ9NZK7 142 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 SELENOKQ9Y6D0 94 aa7.96□□□□□ -1.14
SHMT2-215ENST00000554656 HYDINQ4G0P3 5121 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 RAB19A4D1S5 217 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 OR2J3O76001 311 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 OPRK1P41145 380 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 CAMLGP49069 296 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 CD81P60033 236 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 ATP5G2Q06055 141 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 TEPPQ6URK8 271 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
SHMT2-215ENST00000554656 Q6ZRG5 221 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms