RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 RPP25LQ8N5L8 163 aaKnown RBP5.93□□□□□ -1.46
TDP1-209ENST00000554180 ZNF491Q8N8L2 437 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR51G1Q8NGK1 321 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR10G4Q8NGN3 311 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR10G9Q8NGN4 311 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR10G7Q8NGN6 311 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR1L4Q8NGR5 311 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 LINC01006Q8NI28 216 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 LYPD6BQ8NI32 183 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 FAM213BQ8TBF2 198 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 UBE2E2Q96LR5 201 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 MRPL32Q9BYC8 188 aaKnown RBP5.93□□□□□ -1.46
TDP1-209ENST00000554180 RFNGQ9Y644 331 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 S4R3C0 116 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 NIPBLQ6KC79 2804 aaeCLIP5.93□□□□□ -1.46
TDP1-209ENST00000554180 ATRQ13535 2644 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 CLPSL1A2RUU4 121 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 NUDT19A8MXV4 375 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 COX7A2P2O60397 106 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 HBE1P02100 147 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 RPLP1P05386 114 aaKnown RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 LGALS1P09382 135 aaKnown RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 OR5G3P0C626 314 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 S100A7P31151 101 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 CDX1P47902 265 aaPredicted RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 CDC34P49427 236 aaPredicted RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 RHOBP62745 196 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 KIAA0141Q14154 515 aaPredicted RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 NDUFA5Q16718 116 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 C10orf99Q6UWK7 81 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 CLEC19AQ6UXS0 136 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 OR5AU1Q8NGC0 362 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 Q8WTZ3 238 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 RNF125Q96EQ8 232 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 RCC1LQ96I51 464 aaKnown RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 CHRDL1Q9BU40 450 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 ACTR3CQ9C0K3 210 aaPredicted RBP5.92□□□□□ -1.46
TDP1-209ENST00000554180 VSIRQ9H7M9 311 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 DNAJC4Q9NNZ3 241 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 MED9Q9NWA0 146 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 RNF24Q9Y225 148 aa5.92□□□□□ -1.46
TDP1-209ENST00000554180 A0A1W2PPV4 95 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 WI2-2373I1.2A0A1W2PRP0 233 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 MAP1LC3B2A6NCE7 125 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 BMPR1BO00238 502 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 NDUFA4O00483 81 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 GGCTO75223 188 aaKnown RBP5.91□□□□□ -1.46
TDP1-209ENST00000554180 HYPMO75409 117 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 IL4P05112 153 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 GATA2P23769 480 aaPredicted RBP5.91□□□□□ -1.46
TDP1-209ENST00000554180 ARL3P36405 182 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 FHITP49789 147 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 TAS2R45P59539 299 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 LYZP61626 148 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 ZNF726P1Q15940 193 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 GCSAMLQ5JQS6 135 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 C10orf113Q5VZT2 155 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 LCNL1Q6ZST4 164 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 C4orf3Q8WVX3 66 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 TMEM37Q8WXS4 190 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 RAB24Q969Q5 203 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 MAP1LC3BQ9GZQ8 125 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 MRPL27Q9P0M9 148 aaKnown RBP5.91□□□□□ -1.46
TDP1-209ENST00000554180 PEF1Q9UBV8 284 aaKnown RBP5.91□□□□□ -1.46
TDP1-209ENST00000554180 FUT9Q9Y231 359 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 HIGD1AQ9Y241 93 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 RNF114Q9Y508 228 aa5.91□□□□□ -1.46
TDP1-209ENST00000554180 LINC00862A6NCI5 91 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 I3L521 148 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 IGHV3-11P01762 117 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 STAG3L2P0CL84 134 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 STAG3L3P0CL85 134 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 ORM2P19652 201 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 PROK1P58294 105 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 PMS2P11Q13670 270 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 KHDC3LQ587J8 217 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 TCTEX1D4Q5JR98 221 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 FAM78BQ5VT40 261 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 IL34Q6ZMJ4 242 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 PQLC2Q6ZP29 291 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 STXBP6Q8NFX7 210 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 OR1B1Q8NGR6 318 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 SFT2D1Q8WV19 159 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 PBDC1Q9BVG4 233 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 ZFAND3Q9H8U3 227 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 GNB4Q9HAV0 340 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 SEPSECSQ9HD40 501 aaKnown RBP5.9□□□□□ -1.46
TDP1-209ENST00000554180 TECRQ9NZ01 308 aaKnown RBP5.9□□□□□ -1.46
TDP1-209ENST00000554180 PFDN2Q9UHV9 154 aa5.9□□□□□ -1.46
TDP1-209ENST00000554180 PUS1Q9Y606 427 aaKnown RBP eCLIP5.9□□□□□ -1.46
TDP1-209ENST00000554180 PPP5D1E7EU14 171 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 H3BRN7 92 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 CXorf1O96002 111 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms