RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 NDPQ00604 133 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 MIR17HGQ75NE6 70 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 C12orf57Q99622 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 DERL1Q9BUN8 251 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 CUBNO60494 3623 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 SH2D7A6NKC9 451 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-219ENST00000553745 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 H7BYZ3 331 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 S100A8P05109 93 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 APELAP0DMC3 54 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HOXA5P20719 270 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 IER3P46695 156 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-219ENST00000553745 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 Q6YL49 198 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 ARL2-SNX15V9GYD0 113 aa11.11□□□□□ -0.63
ABCD4-219ENST00000553745 CYSRT1A8MQ03 144 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 CNIH1O95406 144 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 OR5G3P0C626 314 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 AREGP15514 252 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 HNF1AP20823 631 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 FXYD3Q14802 87 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 C11orf52Q96A22 123 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
ABCD4-219ENST00000553745 C19orf24Q9BVV8 132 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 FNDC4Q9H6D8 234 aaPredicted RBP11.1□□□□□ -0.63
ABCD4-219ENST00000553745 TNFRSF19Q9NS68 423 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 PITPNC1Q9UKF7 332 aa11.1□□□□□ -0.63
ABCD4-219ENST00000553745 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 IGLC7A0M8Q6 106 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 MT-CO2P00403 227 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 AMY1AP04745 511 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 REG1AP05451 166 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 CD99P14209 185 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 GATA2P23769 480 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-219ENST00000553745 CX3CL1P78423 397 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 ZNF114Q8NC26 417 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 PRDM13Q9H4Q3 707 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 SRD5A3Q9H8P0 318 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
ABCD4-219ENST00000553745 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 GALR1P47211 349 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 SUB1P53999 127 aaKnown RBP eCLIP11.08□□□□□ -0.64
ABCD4-219ENST00000553745 ZNF562Q6V9R5 426 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 OR5R1Q8NH85 324 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 FRZBQ92765 325 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 ELOVL1Q9BW60 279 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.64
ABCD4-219ENST00000553745 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
ABCD4-219ENST00000553745 GGCTO75223 188 aaKnown RBP11.08□□□□□ -0.64
ABCD4-219ENST00000553745 C19orf35Q6ZS72 473 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 TECRQ9NZ01 308 aaKnown RBP11.08□□□□□ -0.64
ABCD4-219ENST00000553745 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
ABCD4-219ENST00000553745 IGKV1D-37A0A075B6S9 117 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 CRYGCP07315 174 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 TRGC1P0CF51 173 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 NDUFA6P56556 154 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 PQLC2Q6ZP29 291 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 OR5B12Q96R08 314 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
ABCD4-219ENST00000553745 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 ATP6V0E1O15342 81 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 S100PP25815 95 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 CDX1P47902 265 aaPredicted RBP11.06□□□□□ -0.64
ABCD4-219ENST00000553745 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
ABCD4-219ENST00000553745 TCEAL7Q9BRU2 100 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
ABCD4-219ENST00000553745 HIVEP1P15822 2718 aa11.06□□□□□ -0.64
ABCD4-219ENST00000553745 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms