RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 NSD3Q9BZ95 1437 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 TMED7-TICAM2A0A0A6YYA0 188 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 TRAV26-2A0A0B4J265 109 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 TEX50A0A1B0GTY4 177 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 A0A1B0GXF2 115 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 PCNX2A6NKB5 2137 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 C17orf51A8MQB3 221 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 B4DEV8 164 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 C8orf87E5RJ46 101 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 OVOL1O14753 267 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 NPFFO15130 113 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DHRS3O75911 302 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 CXorf1O96002 111 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ATP5G1P05496 136 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 GPX1P07203 203 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 SOD3P08294 240 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 CD14P08571 375 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 NTF3P20783 257 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 PRSS3P35030 304 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ARL2P36404 184 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ZNF83P51522 516 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DEFA1P59665 94 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DEFA3P59666 94 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 YPEL3P61236 119 aaPredicted RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 RPL23P62829 140 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 UBA52P62987 128 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 GRB2P62993 217 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 EIF5AP63241 154 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 FABP5Q01469 135 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 PRDX1Q06830 199 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 PRDX4Q13162 271 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 C12orf74Q32Q52 190 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 TMEM14EPQ6UXP3 125 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 Q6ZRU5 148 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 GTF2H5Q6ZYL4 71 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DAZ4Q86SG3 579 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 TTC9CQ8N5M4 171 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DEFB125Q8N687 156 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 NUP35Q8NFH5 326 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 OR52R1Q8NGF1 315 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 OR8B12Q8NGG6 310 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 NT5CQ8TCD5 201 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 MBD3L1Q8WWY6 194 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 MAGOHBQ96A72 148 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 SLAMF6Q96DU3 332 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ACY3Q96HD9 319 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 RDH12Q96NR8 316 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 S100A13Q99584 98 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 GPR21Q99679 349 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DERL1Q9BUN8 251 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 EMC6Q9BV81 110 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 PBDC1Q9BVG4 233 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 TSSK6Q9BXA6 273 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 MRPL32Q9BYC8 188 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 ULBP3Q9BZM4 244 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 SLC25A31Q9H0C2 315 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 NPVFQ9HCQ7 196 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DAZ1Q9NQZ3 744 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 RPRMQ9NS64 109 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 COMMD9Q9P000 198 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 VAX2Q9UIW0 290 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 CYSLTR1Q9Y271 337 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ZNF443Q9Y2A4 671 aaPredicted RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 MRPS16Q9Y3D3 137 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 LINC00312Q9Y6C7 94 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ENPP4Q9Y6X5 453 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 USP32Q8NFA0 1604 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 DMXL1Q9Y485 3027 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 KDM5AP29375 1690 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 ABCC1P33527 1531 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ZMYM4Q5VZL5 1548 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 KCPQ6ZWJ8 1503 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 LAMB2P55268 1798 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 ANKRD50Q9ULJ7 1429 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 DNAH14Q0VDD8 3507 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 PREX2Q70Z35 1606 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 SVILO95425 2214 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 TRAV5A0A0B4J249 113 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 IGHV1-69-2A0A0G2JMI3 117 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 A0A0J9YXV3 536 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 A0A1B0GV50 99 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 GGT3PA6NGU5 568 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 CD300LBA8K4G0 201 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 GGTLC3B5MD39 225 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 LINC01619G3V211 115 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 H3BQ15 152 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 J3QQQ9 107 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 K7EQS6 105 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 TAX1BP3O14907 124 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 MYL12BO14950 172 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 YPEL1O60688 119 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 NDUFC2O95298 119 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 TNFP01375 233 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 P01737 135 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 SPINK8P0C7L1 97 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 P0DMU3 169 aa1.34□□□□□ -2.19
VRK1-202ENST00000553683 FAM231AP0DMU4 169 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms