RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PNRC1Q12796 327 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-209ENST00000553659 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 SSX7Q7RTT5 188 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 STPG3Q8N7X2 389 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 RBM14Q96PK6 669 aaKnown RBP12.51□□□□□ -0.41
ACTN1-209ENST00000553659 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 SLC25A33Q9BSK2 321 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 SMCO4Q9NRQ5 59 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 SLC45A2Q9UMX9 530 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 IGLC7A0M8Q6 106 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 CGB1A6NKQ9 187 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 YIF1AO95070 293 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 STAG3L2P0CL84 134 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 STAG3L3P0CL85 134 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 NPBWR1P48145 328 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-209ENST00000553659 SELENOTP62341 195 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 MEF2BQ02080 365 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-209ENST00000553659 GAMTQ14353 236 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 MMDQ15546 238 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 MRGPRG-AS1Q2M3A8 158 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-209ENST00000553659 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
ACTN1-209ENST00000553659 M0R036 132 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 AMY1AP04745 511 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 EBI3Q14213 229 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 RITA1Q96K30 269 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 MRPL32Q9BYC8 188 aaKnown RBP12.49□□□□□ -0.41
ACTN1-209ENST00000553659 GPR61Q9BZJ8 451 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 TUBA4BQ9H853 241 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 COL7A1Q02388 2944 aa12.49□□□□□ -0.41
ACTN1-209ENST00000553659 B4DEV8 164 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 M0QZK8 103 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 PDE6DO43924 150 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 HOXD3P31249 432 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-209ENST00000553659 TAS2R45P59539 299 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 C10orf55Q5SWW7 151 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 LINC00482Q8N8I6 264 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 CYB561D1Q8N8Q1 229 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 THAP8Q8NA92 274 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 SRSF12Q8WXF0 261 aaKnown RBP12.48□□□□□ -0.41
ACTN1-209ENST00000553659 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 PRELID1Q9Y255 219 aa12.48□□□□□ -0.41
ACTN1-209ENST00000553659 TMA7Q9Y2S6 64 aaKnown RBP12.48□□□□□ -0.41
ACTN1-209ENST00000553659 F11RQ9Y624 299 aaKnown RBP12.48□□□□□ -0.41
ACTN1-209ENST00000553659 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-209ENST00000553659 E7EUB6 86 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 F6UZH7 168 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 OR10J1P30954 320 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 CYP2G1PQ6ZSU1 146 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 OR1L4Q8NGR5 311 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 DPF1Q92782 380 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 EAF1Q96JC9 268 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-209ENST00000553659 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 PFDN5Q99471 154 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 B9D2Q9BPU9 175 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
ACTN1-209ENST00000553659 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.41
ACTN1-209ENST00000553659 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 TEX22C9J3V5 150 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 H3BQ15 152 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 TSPAN4O14817 238 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 CLN5O75503 358 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 CNIH1O95406 144 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 CRYGCP07315 174 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 FAM106CPP0CH98 169 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 CNTFRP26992 372 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 GNB1P62873 340 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 HES1Q14469 280 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 C5orf64Q2M2E5 130 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 C9orf152Q5JTZ5 239 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 TECRQ9NZ01 308 aaKnown RBP12.46□□□□□ -0.41
ACTN1-209ENST00000553659 FUT9Q9Y231 359 aa12.46□□□□□ -0.41
ACTN1-209ENST00000553659 A0A087WWC5 75 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 OR5G3P0C626 314 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 LINC00869P0C866 280 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 FAM90A2PQ658T7 463 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 Q8N6K4 173 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 TRGV9Q99603 122 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
ACTN1-209ENST00000553659 PUS1Q9Y606 427 aaKnown RBP eCLIP12.45□□□□□ -0.42
ACTN1-209ENST00000553659 FABP1P07148 127 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 CEBPGP53567 150 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 CD81P60033 236 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms