RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 OR10J4P0C629 311 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 FAM106CPP0CH98 169 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 S100PP25815 95 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 FCGR2BP31994 310 aaPredicted RBP4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 RPS10P46783 165 aaKnown RBP4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TAS2R60P59551 318 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF90Q03938 601 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 PRB3Q04118 309 aaPredicted RBP4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 KLRD1Q13241 179 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 FXYD3Q14802 87 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 RUSC1-AS1Q66K80 236 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 FXYD5Q96DB9 178 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 PERPQ96FX8 193 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TMEM68Q96MH6 324 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 PAXXQ9BUH6 204 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 BPESC1Q9GZL8 116 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 OR51M1Q9H341 326 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 MRPL27Q9P0M9 148 aaKnown RBP4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 K7EIM0 57 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 OR7C2O60412 319 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 GCGP01275 180 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 HLA-DRB1P01911 266 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 S100A8P05109 93 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 S100A6P06703 90 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 FABP1P07148 127 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 IGLC1P0CG04 106 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 BRS3P32247 399 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 GALR1P47211 349 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 DSCR9P59020 149 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 YPEL3P61236 119 aaPredicted RBP4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 SNRPEP62304 92 aaKnown RBP4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 CX3CL1P78423 397 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 PLGLAQ15195 96 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 LINC00305Q7Z4B0 112 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 LINC00518Q8N0U6 118 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 ZFP82Q8N141 532 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 Q8N9W7 124 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 OR5AU1Q8NGC0 362 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 C10orf105Q8TEF2 133 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 SFRP2Q96HF1 295 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 OR5B12Q96R08 314 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 TXN2Q99757 166 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 DERL1Q9BUN8 251 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 MEGF9Q9H1U4 602 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 SAV1Q9H4B6 383 aaPredicted RBP4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF355PQ9NSJ1 428 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 TMEM14CQ9P0S9 112 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 RNF24Q9Y225 148 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 URGCP-MRPS24S4R325 110 aa4.74□□□□□ -1.65
VIPAS39-204ENST00000553576 CHD8Q9HCK8 2581 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 IGLV11-55A0A075B6I3 123 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 TRAV5A0A0B4J249 113 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 CENPVL3A0A0U1RRI6 287 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 MDFIC2A0A1B0GVS7 189 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 A0A1W2PRD5 423 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 A0A1W2PRF3 423 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 A0A1W2PRM7 423 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 WI2-2373I1.2A0A1W2PRP0 233 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 TOMM40O96008 361 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 IGLV2-8P01709 118 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 TRGC2P03986 189 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 PSG1P11464 419 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 TMEM11P17152 192 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 CRYBB3P26998 211 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 RPL35P42766 123 aaKnown RBP4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 ASPHD1Q5U4P2 390 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 TEX38Q6PEX7 206 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 LINC01356Q8N9X3 169 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 OR10G8Q8NGN5 311 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 SGMS2Q8NHU3 365 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 SMIM12Q96EX1 92 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 ATP6V0BQ99437 205 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 PIMREGQ9BSJ6 248 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 OSTCQ9NRP0 149 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 THYN1Q9P016 225 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 CDC42EP3Q9UKI2 254 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 KLF12Q9Y4X4 402 aa4.73□□□□□ -1.65
VIPAS39-204ENST00000553576 PKD1L2Q7Z442 2459 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 CACNA1BQ00975 2339 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ABCA2Q9BZC7 2435 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 TACC2O95359 2948 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 IGHV7-81A0A0B4J1V7 117 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 TRBV6-1A0A0K0K1D8 114 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 K7EN84 100 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ISLRO14498 428 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 NPFFO15130 113 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BKO60814 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 BRI3O95415 125 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms