RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 PRSS22Q9GZN4 317 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 OTORQ9NRC9 128 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 TNFRSF19Q9NS68 423 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 ZFP30Q9Y2G7 519 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 GOLT1BQ9Y3E0 138 aa4.33□□□□□ -1.72
CCNT1-204ENST00000551989 TRAV30A0A087WSZ9 112 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TRAV9-2A0A087WT02 112 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 A0A1W2PPI3 338 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 IGLC7A0M8Q6 106 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 LTAP01374 205 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 P01737 135 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 HLA-DRB1P01911 266 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 LIPFP07098 398 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 CRYGBP07316 175 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 NBEAP1P0C6P0 100 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 IGHV1-8P0DP01 117 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 CDKN1AP38936 164 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 MFAP2P55001 183 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 FOXA3P55318 350 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 DLX6P56179 175 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 RBPJQ06330 500 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 PSMG4Q5JS54 123 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM200BQ69YZ2 307 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 MRPL54Q6P161 138 aaKnown RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 RBPMS2Q6ZRY4 209 aaKnown RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 NIT1Q86X76 327 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 SPACA3Q8IXA5 215 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 DEFB124Q8NES8 71 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 OR8B3Q8NGG8 313 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 NPIPB3Q92617 1050 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 DPF1Q92782 380 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 ZNF48Q96MX3 618 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 OR8B2Q96RD0 313 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 ALKBH7Q9BT30 221 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 NDFIP1Q9BT67 221 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 SCNM1Q9BWG6 230 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM191AQ9H0A3 160 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM133Q9H2Q1 129 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 LPAR2Q9HBW0 351 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM160Q9NX00 188 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 JKAMPQ9P055 326 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 CBY1Q9Y3M2 126 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 F11RQ9Y624 299 aaKnown RBP4.32□□□□□ -1.72
CCNT1-204ENST00000551989 TRIOBPQ9H2D6 2365 aa4.32□□□□□ -1.72
CCNT1-204ENST00000551989 LAMA3Q16787 3333 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 IGHV2-26A0A0B4J1V2 119 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 IGHV1-69-2A0A0G2JMI3 117 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 A0A1B0GUS0 222 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 PGPA6NDG6 321 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 CGB1A6NKQ9 187 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 HIGD1CA8MV81 97 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 M0R2Z0 102 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 IGHV3-7P01780 117 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 TCRAP04437 139 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 GP9P14770 177 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 LOXP28300 417 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-204ENST00000551989 RPS20P60866 119 aaKnown RBP4.31□□□□□ -1.72
CCNT1-204ENST00000551989 HOXA4Q00056 320 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-204ENST00000551989 SLAQ13239 276 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 RIGQ13278 110 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 PDE6HQ13956 83 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 FXYD3Q14802 87 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 PLGLAQ15195 96 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 SPRNQ5BIV9 151 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 FAM201AQ5SY85 155 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 PATE2Q6UY27 113 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 Q6ZN92 141 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 Q86TA4 180 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 DEFB108BQ8NET1 73 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 OR10W1Q8NGF6 305 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 RND1Q92730 232 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 RNASE6Q93091 150 aaKnown RBP4.31□□□□□ -1.72
CCNT1-204ENST00000551989 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
CCNT1-204ENST00000551989 TMEM208Q9BTX3 173 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 CLEC7AQ9BXN2 247 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 RAB1BQ9H0U4 201 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 MS4A6AQ9H2W1 248 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 DYNLRB1Q9NP97 96 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 HSPB8Q9UJY1 196 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 ZNF835Q9Y2P0 537 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 LAMTOR2Q9Y2Q5 125 aa4.31□□□□□ -1.72
CCNT1-204ENST00000551989 LAMA2P24043 3122 aaKnown RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 UNC80Q8N2C7 3258 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 F2Z2F3 143 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 H0Y8G0 127 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms