RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TMEM256Q8N2U0 113 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 ACBD7Q8N6N7 88 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 NKAIN3Q8N8D7 197 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 HSD17B11Q8NBQ5 300 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 OR10W1Q8NGF6 305 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 OR4B1Q8NGF8 309 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 OR5AK2Q8NH90 309 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM263Q8WUH6 116 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 DYDC1Q8WWB3 177 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM37Q8WXS4 190 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 RBPMSQ93062 196 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 LSM10Q969L4 123 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 SLC25A46Q96AG3 418 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 NRBF2Q96F24 287 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 C16orf74Q96GX8 76 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 ABHD1Q96SE0 405 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 MYCBPQ99417 103 aaPredicted RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 S100A13Q99584 98 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 HSD17B10Q99714 261 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 PDCD1LG2Q9BQ51 273 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 FAAP24Q9BTP7 215 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 SELENOIQ9C0D9 397 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 SLC35B3Q9H1N7 401 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 DCSTAMPQ9H295 470 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TAS2R4Q9NYW5 299 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TVP23BQ9NYZ1 205 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 KLK11Q9UBX7 282 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 VAX2Q9UIW0 290 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TIMM8BQ9Y5J9 83 aaPredicted RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TNXBP22105 4242 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 FSIP2Q5CZC0 6907 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TRAV8-7A0A075B6U6 113 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 IGHV3OR16-12A0A075B7B8 117 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0G2JND7 137 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 GAGE10A6NGK3 116 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 ERICH4A6NGS2 130 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM14DPA8MWL7 114 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 E9PI62 339 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 UPK2O00526 184 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 ISLRO14498 428 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 SOCS1O15524 211 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 FABP7O15540 132 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 GNG7O60262 68 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 FCGR3BO75015 233 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 CRTAPO75718 401 aaPredicted RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 CST1P01037 141 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 IGKV1-17P01599 117 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 HLA-DQB1P01920 261 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TRAPPC2P0DI81 140 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TRAPPC2BP0DI82 140 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 OR13C7P0DN81 318 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 CD36P16671 472 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 ELK1P19419 428 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 DCKP27707 260 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 HTR2CP28335 458 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 CDKN1BP46527 198 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TAS2R31P59538 309 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 RPS11P62280 158 aaKnown RBP eCLIP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 RPL30P62888 115 aaKnown RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 PPP3R1P63098 170 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 DAZ2Q13117 558 aaKnown RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 DHRS2Q13268 280 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 RIGQ13278 110 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TBCEQ15813 527 aaPredicted RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 KIAA1644Q3SXP7 199 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 Q56UQ5 140 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 C1orf100Q5SVJ3 147 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 FAM78BQ5VT40 261 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TTC23Q5W5X9 447 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 LYPD5Q6UWN5 251 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 LHFPL3Q86UP9 236 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 WFDC10BQ8IUB3 73 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 CMTM1Q8IZ96 169 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 OR6M1Q8NGM8 313 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 OR8J1Q8NGP2 316 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 OR10J5Q8NHC4 309 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 MRPL48Q96GC5 212 aaKnown RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 C4orf36Q96KX1 117 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 Q96MT0 163 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 METTL26Q96S19 204 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 TBX5Q99593 518 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 SLC29A1Q99808 456 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 C20orf144Q9BQM9 153 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 COMMD5Q9GZQ3 224 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 BANF2Q9H503 90 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 DNAJC4Q9NNZ3 241 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 PLCXD1Q9NUJ7 323 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 RBMX2Q9Y388 322 aaKnown RBP1.42□□□□□ -2.18
PTCH1-223ENST00000551623 ICOSQ9Y6W8 199 aa1.42□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0A6YYD4 124 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0D9SG52 128 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0J9YY99 117 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TEX50A0A1B0GTY4 177 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 DAPL1A0PJW8 107 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 RNF222A6NCQ9 220 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF98A6NK75 572 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF705GA8MUZ8 300 aaPredicted RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 KRTAP4-16G5E9R7 235 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms