RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SFRP2Q96HF1 295 aa9.04□□□□□ -0.96
RAB5C-208ENST00000551338 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
RAB5C-208ENST00000551338 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
RAB5C-208ENST00000551338 KLK9Q9UKQ9 250 aa9.04□□□□□ -0.96
RAB5C-208ENST00000551338 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 A1L4Q6 167 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 HELTA6NFD8 242 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 PHOX2AO14813 284 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 OR2J3O76001 311 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 IGLV2-8P01709 118 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 FABP1P07148 127 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 MSMBP08118 114 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 MFAP4P55083 255 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 DSCR9P59020 149 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
RAB5C-208ENST00000551338 C5orf56Q8N8D9 126 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 SGMS2Q8NHU3 365 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 SRD5A3Q9H8P0 318 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
RAB5C-208ENST00000551338 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 A0A096LNT2 108 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 A0A0U1RQK1 487 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 A0A1W2PPQ1 181 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
RAB5C-208ENST00000551338 PEX7O00628 323 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 UBE2CO00762 179 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 GNG7O60262 68 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 TRGC2P03986 189 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
RAB5C-208ENST00000551338 RD3LP0DJH9 198 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 SLC25A16P16260 332 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 TAS2R60P59551 318 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.97
RAB5C-208ENST00000551338 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 CLEC12BQ2HXU8 276 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 LEMD1Q68G75 181 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 UNQ5815/PRO19632Q6UWF5 114 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 ZNF491Q8N8L2 437 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 IMMP2LQ96T52 175 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 MOB4Q9Y3A3 225 aa9.02□□□□□ -0.97
RAB5C-208ENST00000551338 ZZEF1O43149 2961 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 AP4M1O00189 453 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
RAB5C-208ENST00000551338 GCGP01275 180 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 TYMSP04818 313 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 S100A6P06703 90 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 NBEAP1P0C6P0 100 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H1BP16401 226 aaKnown RBP9.01□□□□□ -0.97
RAB5C-208ENST00000551338 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
RAB5C-208ENST00000551338 GNG4P50150 75 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 GNG5P63218 68 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 Q56UQ5 140 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 KCNIP4Q6PIL6 250 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 BLNKQ8WV28 456 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 FRZBQ92765 325 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 RNF125Q96EQ8 232 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 ZNF414Q96IQ9 312 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
RAB5C-208ENST00000551338 SOX21Q9Y651 276 aaPredicted RBP9.01□□□□□ -0.97
RAB5C-208ENST00000551338 NBEAQ8NFP9 2946 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 LINC01548A6NM66 108 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 H3BTX0 84 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BKO60814 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 IGHV3-23P01764 117 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 IL4P05112 153 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BJP06899 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 TRGC1P0CF51 173 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BOP23527 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BBP33778 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 CNN1P51911 297 aaKnown RBP9□□□□□ -0.97
RAB5C-208ENST00000551338 FAM3BP58499 235 aaPredicted RBP9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BDP58876 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BCP62807 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 OR5I1Q13606 314 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 USF2Q15853 346 aaPredicted RBP9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 C19orf54Q5BKX5 351 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
RAB5C-208ENST00000551338 ZNF600Q6ZNG1 722 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 TMEM219Q86XT9 240 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 TCEAL7Q9BRU2 100 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 Q9H3A6 140 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 OSTCQ9NRP0 149 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 IL36BQ9NZH7 164 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 THYN1Q9P016 225 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 FBXL7Q9UJT9 491 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 CDC42EP3Q9UKI2 254 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms