RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PPCDCQ96CD2 204 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 STARD4Q96DR4 205 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 ACY3Q96HD9 319 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 CAPZA3Q96KX2 299 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 FAAP24Q9BTP7 215 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TMEM70Q9BUB7 260 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 EBPLQ9BY08 206 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TBL1XR1Q9BZK7 514 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 OR51I2Q9H344 312 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 JPT1Q9UK76 154 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 KLF13Q9Y2Y9 288 aaPredicted RBP3.34□□□□□ -1.87
CPSF6-206ENST00000550987 UTP11Q9Y3A2 253 aaKnown RBP3.34□□□□□ -1.87
CPSF6-206ENST00000550987 KIAA1549Q9HCM3 1950 aa3.34□□□□□ -1.88
CPSF6-206ENST00000550987 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 NCKAP5O14513 1909 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 TET2Q6N021 2002 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 HEATR5BQ9P2D3 2071 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 IGHV3-49A0A0A0MS15 119 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 IGHV3-72A0A0B4J1Y9 119 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 EXOC1LA0A1B0GW35 172 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 MAP1LC3B2A6NCE7 125 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 CCL22O00626 93 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 DDTP30046 118 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 HSPE1P61604 102 aaKnown RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 TBPL1P62380 186 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 GRB2P62993 217 aaKnown RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 EMX1Q04741 257 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 SMAGPQ0VAQ4 97 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 ACOT6Q3I5F7 207 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 LINC00483Q53H64 154 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 RNASE10Q5GAN6 216 aaKnown RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 TNFAIP8L3Q5GJ75 292 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 OR10K2Q6IF99 312 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 LPCAT3Q6P1A2 487 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 Q6ZR03 302 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 RPP25LQ8N5L8 163 aaKnown RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 PLPP5Q8NEB5 264 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 OR2K2Q8NGT1 345 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 SLC25A46Q96AG3 418 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 NEURL3Q96EH8 262 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 DIRAS2Q96HU8 199 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 DNAJC30Q96LL9 226 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 CCDC32Q9BV29 185 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 GGACTQ9BVM4 153 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 MAP1LC3BQ9GZQ8 125 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 METTL17Q9H7H0 456 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-206ENST00000550987 C21orf62Q9NYP8 219 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 HEY1Q9Y5J3 304 aa3.33□□□□□ -1.88
CPSF6-206ENST00000550987 NINQ8N4C6 2090 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 FREM3P0C091 2139 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 LRP1BQ9NZR2 4599 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 IGKV2D-24A0A075B6R9 120 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 A0A0G2JMM0 328 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 A0A1W2PPB8 328 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 A0A1W2PRS3 328 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 OR4C46A6NHA9 309 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 KIR3DP1A8MWS1 328 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 DHRS3O75911 302 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 DBIP07108 87 aaKnown RBP3.32□□□□□ -1.88
CPSF6-206ENST00000550987 GABRA1P14867 456 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 IL3RAP26951 378 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 PHBP35232 272 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 ASIPP42127 132 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 SERPINB10P48595 397 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 PIGPP57054 158 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 UBA52P62987 128 aaKnown RBP3.32□□□□□ -1.88
CPSF6-206ENST00000550987 PLGLB1Q02325 96 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 EBPQ15125 230 aaKnown RBP3.32□□□□□ -1.88
CPSF6-206ENST00000550987 PLPPR5Q32ZL2 321 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 DNLZQ5SXM8 178 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 CLEC19AQ6UXS0 136 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 FA2HQ7L5A8 372 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 TMEM86BQ8N661 226 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 BLNKQ8WV28 456 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 TSLPQ969D9 159 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 BIRC8Q96P09 236 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 HSPB9Q9BQS6 159 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 TTTY12Q9BZ98 90 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 TAS2R5Q9NYW4 299 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 IDI2-AS1Q9NZ38 188 aa3.32□□□□□ -1.88
CPSF6-206ENST00000550987 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 EEF1E1-BLOC1S5C9J1V9 151 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 K7ERU9 68 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 FAAHO00519 579 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 HMGB3O15347 200 aaKnown RBP3.31□□□□□ -1.88
CPSF6-206ENST00000550987 CYB5BO43169 146 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 EEF1E1O43324 174 aaKnown RBP3.31□□□□□ -1.88
CPSF6-206ENST00000550987 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
CPSF6-206ENST00000550987 OR1I1O60431 355 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 EPPINO95925 133 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 TTRP02766 147 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 GZMHP20718 246 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 KDELR1P24390 212 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 TSPOP30536 169 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 AGTR1P30556 359 aa3.31□□□□□ -1.88
CPSF6-206ENST00000550987 GZMMP51124 257 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms