RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 INO80EQ8NBZ0 244 aaPredicted RBP10.28□□□□□ -0.76
ERBB3-215ENST00000550828 CYTL1Q9NRR1 136 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 AGPAT2O15120 278 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 ZNF207O43670 478 aaKnown RBP10.27□□□□□ -0.77
ERBB3-215ENST00000550828 LINC00869P0C866 280 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
ERBB3-215ENST00000550828 USF2Q15853 346 aaPredicted RBP10.27□□□□□ -0.77
ERBB3-215ENST00000550828 LGALSLQ3ZCW2 172 aaPredicted RBP10.27□□□□□ -0.77
ERBB3-215ENST00000550828 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 LAMTOR1Q6IAA8 161 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
ERBB3-215ENST00000550828 WDR61Q9GZS3 305 aaKnown RBP10.27□□□□□ -0.77
ERBB3-215ENST00000550828 A8MWP6 167 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 LGALS9O00182 355 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 OVOL1O14753 267 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 CSN3P07498 182 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 RD3LP0DJH9 198 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
ERBB3-215ENST00000550828 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
ERBB3-215ENST00000550828 ZNF345Q14585 488 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 OPCMLQ14982 345 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 RPL7L1Q6DKI1 246 aaKnown RBP10.26□□□□□ -0.77
ERBB3-215ENST00000550828 C9orf62Q8N4C0 152 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 OR51G1Q8NGK1 321 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 RSG1Q9BU20 258 aa10.26□□□□□ -0.77
ERBB3-215ENST00000550828 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 C2orf70A6NJV1 201 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 DFFBO76075 338 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 YIF1AO95070 293 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PRR20EP86478 221 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PRR20CP86479 221 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PRR20DP86480 221 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PRR20BP86481 221 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PRR20AP86496 221 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 FAM106AQ4KMX7 169 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 C20orf24Q9BUV8 137 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 NPCDR1Q9BY65 106 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
ERBB3-215ENST00000550828 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
ERBB3-215ENST00000550828 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 APOHP02749 345 aaPredicted RBP10.24□□□□□ -0.77
ERBB3-215ENST00000550828 IL4P05112 153 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 CAMLGP49069 296 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 TMUB2Q71RG4 321 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 Q8WTZ3 238 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 RNF125Q96EQ8 232 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 HYLS1Q96M11 299 aa10.24□□□□□ -0.77
ERBB3-215ENST00000550828 SORL1Q92673 2214 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 C8orf88P0DMB2 117 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 IGLL1P15814 213 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 LYZP61626 148 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 GCSAMLQ5JQS6 135 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 PATE2Q6UY27 113 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 ARL6Q9H0F7 186 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 SH3BGRL3Q9H299 93 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 ARV1Q9H2C2 271 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 DAZ1Q9NQZ3 744 aaKnown RBP10.23□□□□□ -0.77
ERBB3-215ENST00000550828 DOK5Q9P104 306 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 PXMP4Q9Y6I8 212 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 U3KQE9 123 aa10.23□□□□□ -0.77
ERBB3-215ENST00000550828 IGHV3OR16-13A0A075B7E8 117 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 IGHV3-74A0A0B4J1X5 117 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 A0A0D9SG52 128 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 SEC14L6B5MCN3 397 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 K7EMT4 169 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 BCL2L11O43521 198 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 PFDN1O60925 122 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 MPDU1O75352 247 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 SCGB2A1O75556 95 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 IFNA5P01569 189 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 FOLR2P14207 255 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 CD33P20138 364 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 CBLN1P23435 193 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
ERBB3-215ENST00000550828 ELLP55199 621 aaPredicted RBP10.22□□□□□ -0.77
ERBB3-215ENST00000550828 PLP1P60201 277 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 SELENOTP62341 195 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 PBDC1Q9BVG4 233 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 SLC39A9Q9NUM3 307 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 MLXQ9UH92 298 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 UFC1Q9Y3C8 167 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
ERBB3-215ENST00000550828 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 FABP1P07148 127 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 CRYBB3P26998 211 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 MORN5Q5VZ52 161 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 HSD17B11Q8NBQ5 300 aa10.21□□□□□ -0.77
ERBB3-215ENST00000550828 ST8SIA2Q92186 375 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms