RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 FOXL1Q12952 345 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 FFAR4Q5NUL3 377 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 STPG3Q8N7X2 389 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 BPIFCQ8NFQ6 507 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 SLC39A9Q9NUM3 307 aa10.9□□□□□ -0.66
CACNB3-216ENST00000550391 PEF1Q9UBV8 284 aaKnown RBP10.9□□□□□ -0.66
CACNB3-216ENST00000550391 ANKRD34BA5PLL1 514 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 TOMM40O96008 361 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 MBP02144 154 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
CACNB3-216ENST00000550391 LINC00869P0C866 280 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 ARL3P36405 182 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 B2MP61769 119 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 AKR1C8PQ5T2L2 129 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
CACNB3-216ENST00000550391 Q6ZRG5 221 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 Q8WTZ3 238 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 CHRDL1Q9BU40 450 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 GNB4Q9HAV0 340 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 UBQLN2Q9UHD9 624 aa10.89□□□□□ -0.67
CACNB3-216ENST00000550391 PRKDCP78527 4128 aaKnown RBP10.89□□□□□ -0.67
CACNB3-216ENST00000550391 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 CD28P10747 220 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 PSG1P11464 419 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 GATA2P23769 480 aaPredicted RBP10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ADMP35318 185 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 RAB5CP51148 216 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ELLP55199 621 aaPredicted RBP10.88□□□□□ -0.67
CACNB3-216ENST00000550391 RELQ04864 619 aaPredicted RBP10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ACOT6Q3I5F7 207 aaPredicted RBP10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ZNF600Q6ZNG1 722 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 OR5B12Q96R08 314 aa10.88□□□□□ -0.67
CACNB3-216ENST00000550391 PPP5D1E7EU14 171 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 GGCTO75223 188 aaKnown RBP10.87□□□□□ -0.67
CACNB3-216ENST00000550391 YIF1AO95070 293 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 SULT1A2P50226 295 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 KRTAP10-3P60369 221 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 TMEM41BQ5BJD5 291 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 FAM74A1Q5RGS3 127 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 PXDC1Q5TGL8 231 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 OR51G1Q8NGK1 321 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 C4orf3Q8WVX3 66 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
CACNB3-216ENST00000550391 TSSC4Q9Y5U2 329 aaPredicted RBP10.87□□□□□ -0.67
CACNB3-216ENST00000550391 KMT2CQ8NEZ4 4911 aaKnown RBP10.86□□□□□ -0.67
CACNB3-216ENST00000550391 WI2-2373I1.2A0A1W2PRP0 233 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 I3L521 148 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 BMPR1BO00238 502 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 OR2C1O95371 312 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
CACNB3-216ENST00000550391 M6PRP20645 277 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 PLP1P60201 277 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 OR1L4Q8NGR5 311 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 CITED2Q99967 270 aaPredicted RBP10.86□□□□□ -0.67
CACNB3-216ENST00000550391 DNAJC4Q9NNZ3 241 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 RPRMQ9NS64 109 aa10.86□□□□□ -0.67
CACNB3-216ENST00000550391 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
CACNB3-216ENST00000550391 ELOA3CA0A087WX78 387 aaPredicted RBP10.85□□□□□ -0.67
CACNB3-216ENST00000550391 NUDT19A8MXV4 375 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 HYPMO75409 117 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 RAB2AP61019 212 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 LYZP61626 148 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 C11orf44Q8N8P7 122 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 KLHL30-AS1Q8NEE0 82 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 OR10G9Q8NGN4 311 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 OR10G7Q8NGN6 311 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 LRRC20Q8TCA0 184 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 PFDN5Q99471 154 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
CACNB3-216ENST00000550391 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 NDUFA4O00483 81 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 RGS13O14921 159 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 COX7A2P2O60397 106 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 IL4P05112 153 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 ORM2P19652 201 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 AWAT1Q58HT5 328 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 GCSAMLQ5JQS6 135 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 TOMM20LQ6UXN7 152 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 OR1B1Q8NGR6 318 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 RNF125Q96EQ8 232 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 RNF2Q99496 336 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 ACTR3CQ9C0K3 210 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-216ENST00000550391 DOK5Q9P104 306 aa10.84□□□□□ -0.67
CACNB3-216ENST00000550391 ZNF705EA8MWA4 302 aaPredicted RBP10.83□□□□□ -0.68
CACNB3-216ENST00000550391 OR5G3P0C626 314 aa10.83□□□□□ -0.68
CACNB3-216ENST00000550391 ZP3P21754 424 aa10.83□□□□□ -0.68
CACNB3-216ENST00000550391 RAB14P61106 215 aa10.83□□□□□ -0.68
CACNB3-216ENST00000550391 RHOBP62745 196 aa10.83□□□□□ -0.68
CACNB3-216ENST00000550391 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms