RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ID3Q02535 119 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 IAH1Q2TAA2 248 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 MZT2BQ6NZ67 158 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 RNF125Q96EQ8 232 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 U3KQE9 123 aa12.77□□□□□ -0.37
CHMP1A-208ENST00000550102 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 PRSS46E5RG02 174 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 ASAH1Q13510 395 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 GLMPQ8WWB7 406 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 TRGV9Q99603 122 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
CHMP1A-208ENST00000550102 FAM240BA0A1B0GVZ2 78 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 UBE2CO00762 179 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 SCGB1D2O95969 90 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 LYL1P12980 280 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 C16orf54Q6UWD8 224 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 Q6ZWC4 215 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 STPG3Q8N7X2 389 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 THAP8Q8NA92 274 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 ZBTB8BQ8NAP8 495 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 PBDC1Q9BVG4 233 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 PFDN2Q9UHV9 154 aa12.75□□□□□ -0.37
CHMP1A-208ENST00000550102 K7EQG2 157 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 H2AFB2P0C5Z0 115 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 ZNF90Q03938 601 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 AKR1C1Q04828 323 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 ZNF124Q15973 351 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 DEFB135Q30KP9 77 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 ACOT7LQ6ZUV0 252 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 ZNF431Q8TF32 576 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 SEC22CQ9BRL7 303 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 TENM2Q9NT68 2774 aa12.74□□□□□ -0.37
CHMP1A-208ENST00000550102 CCSO14618 274 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 UPK1BO75841 260 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 AP2S1P53680 142 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 DEFB131AP59861 70 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 LYZP61626 148 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 SMIM8Q96KF7 97 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 RAB40CQ96S21 281 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 BATF3Q9NR55 127 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
CHMP1A-208ENST00000550102 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 SNRPGP15A8MWD9 76 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 BUB3O43684 328 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 OR2F1Q13607 317 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 LEMD1Q68G75 181 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 SIGLEC15Q6ZMC9 328 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 DCANP1Q8TF63 244 aa12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 RCL1Q9Y2P8 373 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-208ENST00000550102 AGRNO00468 2067 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 FAM25EA8MYX2 175 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 SPRY2O43597 315 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 TSC22D2O75157 780 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 ZNF688P0C7X2 276 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 TAS2R30P59541 319 aa12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-208ENST00000550102 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
CHMP1A-208ENST00000550102 MBPP02686 304 aaPredicted RBP12.7□□□□□ -0.38
CHMP1A-208ENST00000550102 PPP1R14BQ96C90 147 aa12.7□□□□□ -0.38
CHMP1A-208ENST00000550102 NRN1Q9NPD7 142 aa12.7□□□□□ -0.38
CHMP1A-208ENST00000550102 FBXL17Q9UF56 701 aa12.7□□□□□ -0.38
CHMP1A-208ENST00000550102 C5orf51A6NDU8 294 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 PAX9P55771 341 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 DLK1P80370 383 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 C1orf194Q5T5A4 169 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 ZFAND6Q6FIF0 208 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 TMEM14EPQ6UXP3 125 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 TMEM144Q7Z5S9 345 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 STHQ8IWL8 128 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 RNF183Q96D59 192 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-208ENST00000550102 SNRPD3P62318 126 aaKnown RBP12.68□□□□□ -0.38
CHMP1A-208ENST00000550102 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
CHMP1A-208ENST00000550102 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
CHMP1A-208ENST00000550102 C7orf66A4D0T2 115 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 PMS2P5A8MQ11 134 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 FNDC10F2Z333 226 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 L7N2F9 121 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 CCNKO75909 580 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 IL5P05113 134 aa12.67□□□□□ -0.38
CHMP1A-208ENST00000550102 VAMP2P63027 116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms