RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
COX6A1-203ENST00000550009 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 BUB3O43684 328 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 CD5P06127 495 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 OR2F1Q13607 317 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 GDF5OSQ5U4N7 250 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 PBDC1Q9BVG4 233 aa11.54□□□□□ -0.56
COX6A1-203ENST00000550009 WDR12Q9GZL7 423 aaKnown RBP11.54□□□□□ -0.56
COX6A1-203ENST00000550009 C11orf68Q9H3H3 251 aaKnown RBP11.54□□□□□ -0.56
COX6A1-203ENST00000550009 IFNA4P05014 189 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 ATF4P18848 351 aaPredicted RBP11.53□□□□□ -0.56
COX6A1-203ENST00000550009 VAMP1P23763 118 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 PRR20EP86478 221 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 PRR20CP86479 221 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 PRR20DP86480 221 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 PRR20BP86481 221 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 PRR20AP86496 221 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 BAK1Q16611 211 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 SCGB3A2Q96PL1 93 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 U3KQ87 197 aa11.53□□□□□ -0.56
COX6A1-203ENST00000550009 HELTA6NFD8 242 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 HOXB5P09067 269 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 FXYD7P58549 80 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 SIGLEC15Q6ZMC9 328 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
COX6A1-203ENST00000550009 ZNF767PQ75MW2 155 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 RNF125Q96EQ8 232 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 SDHCQ99643 169 aaPredicted RBP11.52□□□□□ -0.57
COX6A1-203ENST00000550009 SRRQ9GZT4 340 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
COX6A1-203ENST00000550009 DNAH2Q9P225 4427 aa11.52□□□□□ -0.57
COX6A1-203ENST00000550009 LINC00854A0A1B0GVQ3 168 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 SFT2D2O95562 160 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 GATA2P23769 480 aaPredicted RBP11.51□□□□□ -0.57
COX6A1-203ENST00000550009 LYZP61626 148 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 TMEM128Q5BJH2 165 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
COX6A1-203ENST00000550009 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 SCRT1Q9BWW7 348 aa11.51□□□□□ -0.57
COX6A1-203ENST00000550009 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 PRSS46E5RG02 174 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 H3BP45 60 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 WRBO00258 174 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 ADAP1O75689 374 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 IGKV3-20P01619 116 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 TMEM217Q8N7C4 229 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
COX6A1-203ENST00000550009 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
COX6A1-203ENST00000550009 DNAH17Q9UFH2 4485 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 ZNF705EA8MWA4 302 aaPredicted RBP11.49□□□□□ -0.57
COX6A1-203ENST00000550009 H3BMM0 161 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 SCGB2A1O75556 95 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 CCNKO75909 580 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
COX6A1-203ENST00000550009 ANXA3P12429 323 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 FAUP35544 74 aaKnown RBP11.49□□□□□ -0.57
COX6A1-203ENST00000550009 EIF2B2P49770 351 aaKnown RBP11.49□□□□□ -0.57
COX6A1-203ENST00000550009 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
COX6A1-203ENST00000550009 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 F6UB75 175 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 SOCS3O14543 225 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 SPP1P10451 314 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 BTCP35070 178 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
COX6A1-203ENST00000550009 SRPXP78539 464 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 Q6ZTC4 211 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
COX6A1-203ENST00000550009 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 AP3S2P59780 193 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 MORN3Q6PF18 240 aaPredicted RBP11.47□□□□□ -0.57
COX6A1-203ENST00000550009 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 CENPSQ8N2Z9 138 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
COX6A1-203ENST00000550009 DUXBA0A1W2PPF3 345 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 IGLL5B9A064 214 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 SYNGR2O43760 224 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 S100A5P33763 92 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 UBE2MP61081 183 aaKnown RBP11.46□□□□□ -0.57
COX6A1-203ENST00000550009 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
COX6A1-203ENST00000550009 SPANXN5Q5MJ07 72 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 THAP8Q8NA92 274 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 SLC25A21Q9BQT8 299 aaPredicted RBP11.46□□□□□ -0.57
COX6A1-203ENST00000550009 TBC1D24Q9ULP9 559 aa11.46□□□□□ -0.57
COX6A1-203ENST00000550009 SLC25A6P12236 298 aa11.45□□□□□ -0.58
COX6A1-203ENST00000550009 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
COX6A1-203ENST00000550009 ANXA7P20073 488 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms