RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 HAX1O00165 279 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
LETMD1-220ENST00000549686 OR2C1O95371 312 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 S100A7P31151 101 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 ELLP55199 621 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-220ENST00000549686 SRSF2Q01130 221 aaKnown RBP13.44□□□□□ -0.26
LETMD1-220ENST00000549686 TCTEX1D4Q5JR98 221 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-220ENST00000549686 RNF2Q99496 336 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 CHRDL1Q9BU40 450 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
LETMD1-220ENST00000549686 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-220ENST00000549686 RAB14P61106 215 aa13.43□□□□□ -0.26
LETMD1-220ENST00000549686 GATAD1Q8WUU5 269 aa13.43□□□□□ -0.26
LETMD1-220ENST00000549686 YIF1AO95070 293 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 GATA2P23769 480 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-220ENST00000549686 KHDC1LQ5JSQ8 128 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 OR10G4Q8NGN3 311 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-220ENST00000549686 RNF24Q9Y225 148 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 RFNGQ9Y644 331 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
LETMD1-220ENST00000549686 WI2-2373I1.2A0A1W2PRP0 233 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 ANKRD34BA5PLL1 514 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 PPP5D1E7EU14 171 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 I3L521 148 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 NDUFA4O00483 81 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 COX7A2P2O60397 106 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 HYPMO75409 117 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
LETMD1-220ENST00000549686 CD28P10747 220 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 BLOC1S1P78537 153 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 FAM74A1Q5RGS3 127 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 RNF125Q96EQ8 232 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 MRPL32Q9BYC8 188 aaKnown RBP13.41□□□□□ -0.26
LETMD1-220ENST00000549686 ACTR3CQ9C0K3 210 aaPredicted RBP13.41□□□□□ -0.26
LETMD1-220ENST00000549686 DNAJC4Q9NNZ3 241 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 RPRMQ9NS64 109 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 PFDN2Q9UHV9 154 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 PUS1Q9Y606 427 aaKnown RBP eCLIP13.41□□□□□ -0.26
LETMD1-220ENST00000549686 CUBNO60494 3623 aa13.41□□□□□ -0.26
LETMD1-220ENST00000549686 ZNF705EA8MWA4 302 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-220ENST00000549686 SEC14L6B5MCN3 397 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 BMPR1BO00238 502 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 TRBV12-3P01733 135 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 IL4P05112 153 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 ZP3P21754 424 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 RAB2AP61019 212 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 LYZP61626 148 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 RHOBP62745 196 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 C10orf113Q5VZT2 155 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 OR5B12Q96R08 314 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
LETMD1-220ENST00000549686 A0A1W2PPV4 95 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 OR5G3P0C626 314 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 ORM2P19652 201 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 CDC34P49427 236 aaPredicted RBP13.39□□□□□ -0.27
LETMD1-220ENST00000549686 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 FAM106AQ4KMX7 169 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
LETMD1-220ENST00000549686 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 CITED2Q99967 270 aaPredicted RBP13.39□□□□□ -0.27
LETMD1-220ENST00000549686 VSIRQ9H7M9 311 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 HIGD1AQ9Y241 93 aa13.39□□□□□ -0.27
LETMD1-220ENST00000549686 TEP1Q99973 2627 aaKnown RBP13.38□□□□□ -0.27
LETMD1-220ENST00000549686 CTXND1A0A1B0GTU2 59 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 DPF1Q92782 380 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 PBDC1Q9BVG4 233 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 ZFAND3Q9H8U3 227 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 MRPL27Q9P0M9 148 aaKnown RBP13.38□□□□□ -0.27
LETMD1-220ENST00000549686 FUT9Q9Y231 359 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
LETMD1-220ENST00000549686 LINC01619G3V211 115 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 TAS2R45P59539 299 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 AWAT1Q58HT5 328 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 GCSAMLQ5JQS6 135 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 CLLU1Q5K131 121 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 FAM78BQ5VT40 261 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 PRIMA1Q86XR5 153 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 TMEM190Q8WZ59 177 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
LETMD1-220ENST00000549686 DOK5Q9P104 306 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
LETMD1-220ENST00000549686 IGHV4OR15-8A0A075B7B6 117 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 A0A087WW49 117 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 HBE1P02100 147 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 H2AFB1P0C5Y9 115 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms