RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 TIMM9Q9Y5J7 89 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 A0A1W2PS18 150 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 F8W735 103 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 K7EMT4 169 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 BCL2L11O43521 198 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 OR2C1O95371 312 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 IGHV3-23P01764 117 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 HOXD3P31249 432 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 RPL29P47914 159 aaKnown RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 CAMLGP49069 296 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 KRTAP10-3P60369 221 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 Q5BKY6 102 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 BTNL8Q6UX41 500 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 OR1L4Q8NGR5 311 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 RAX2Q96IS3 184 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 METTL26Q96S19 204 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 PFDN5Q99471 154 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 RNF2Q99496 336 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 WDR61Q9GZS3 305 aaKnown RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 ZMAT5Q9UDW3 170 aaKnown RBP7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 ANK2Q01484 3957 aa7.52□□□□□ -1.21
SMARCD1-206ENST00000549274 WNK1Q9H4A3 2382 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 IGHV4OR15-8A0A075B7B6 117 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 A0A087WW49 117 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 A8MWP6 167 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 SMLR1H3BR10 107 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 OVOL1O14753 267 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 AGPAT2O15120 278 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 YIF1AO95070 293 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 IGKV1-17P01599 117 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 IGHV3-48P01763 117 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 MBP02144 154 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 EIF2B2P49770 351 aaKnown RBP7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 INSL3P51460 131 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 SERF2P84101 59 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 DEFA5Q01523 94 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 KLF5Q13887 457 aaPredicted RBP7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 MLANAQ16655 118 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 TMUB2Q71RG4 321 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 TMEM190Q8WZ59 177 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 RABAC1Q9UI14 185 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 S4R3C0 116 aa7.51□□□□□ -1.21
SMARCD1-206ENST00000549274 PPP5D1E7EU14 171 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 TSPAN15O95858 294 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 PSG1P11464 419 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 TPT1P13693 172 aaKnown RBP7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 NPPCP23582 126 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 ADMP35318 185 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 PLP1P60201 277 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 OPCMLQ14982 345 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 TIGITQ495A1 244 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 SLC51BQ86UW2 128 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 OR11H4Q8NGC9 324 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 OR9G4Q8NGQ1 327 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 RNF125Q96EQ8 232 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 CHRDL1Q9BU40 450 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 GGTLC1Q9BX51 225 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 ZNF471Q9BX82 626 aaPredicted RBP7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 SMIM3Q9BZL3 60 aa7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 PUS1Q9Y606 427 aaKnown RBP eCLIP7.5□□□□□ -1.21
SMARCD1-206ENST00000549274 IGKV1D-37A0A075B6S9 117 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 IGKV1OR2-108A0A075B7D4 117 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 WI2-2373I1.2A0A1W2PRP0 233 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 ZNF320A2RRD8 509 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 COX7A2P2O60397 106 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 HYPMO75409 117 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 TRBV12-3P01733 135 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 IL4P05112 153 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 HNRNPCP07910 306 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 LINC00869P0C866 280 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 CD33P20138 364 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 SYNJ2BPP57105 145 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 B2MP61769 119 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 DEFB136Q30KP8 78 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 TOMM20LQ6UXN7 152 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 C18orf65Q6ZTR6 163 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 LINC00482Q8N8I6 264 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 STOML3Q8TAV4 291 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 GATAD1Q8WUU5 269 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 RCC1LQ96I51 464 aaKnown RBP7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 GPR82Q96P67 336 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 MGST2Q99735 147 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 MDFIQ99750 246 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 C20orf24Q9BUV8 137 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 MRPL36Q9P0J6 103 aaKnown RBP7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 MRPL27Q9P0M9 148 aaKnown RBP7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 PXMP4Q9Y6I8 212 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms