RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 H2AFB2P0C5Z0 115 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
DDX54-205ENST00000548786 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 ZFAND6Q6FIF0 208 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 OR8G2PQ6IF36 304 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 MUC7Q8TAX7 377 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 GRAMD2BQ96HH9 432 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
DDX54-205ENST00000548786 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 DEFB131AP59861 70 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 LYZP61626 148 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 ID3Q02535 119 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 DEFB135Q30KP9 77 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 MZT2BQ6NZ67 158 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 LINC00299Q6ZSB3 139 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 ACOT7LQ6ZUV0 252 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
DDX54-205ENST00000548786 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 WDR12Q9GZL7 423 aaKnown RBP11.68□□□□□ -0.54
DDX54-205ENST00000548786 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
DDX54-205ENST00000548786 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
DDX54-205ENST00000548786 IGKV1OR2-108A0A075B7D4 117 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 PRSS46E5RG02 174 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 CCNKO75909 580 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 CD5P06127 495 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 APOC4P55056 127 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 AKR1C1Q04828 323 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 ASAH1Q13510 395 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 ZNF431Q8TF32 576 aaPredicted RBP11.67□□□□□ -0.54
DDX54-205ENST00000548786 U3KQE9 123 aa11.67□□□□□ -0.54
DDX54-205ENST00000548786 UPK1BO75841 260 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 ZNF688P0C7X2 276 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 LYL1P12980 280 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 RRAS2P62070 204 aaPredicted RBP11.66□□□□□ -0.54
DDX54-205ENST00000548786 IFITM3Q01628 133 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 GSG1LQ6UXU4 331 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 ENKURQ8TC29 256 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 GLMPQ8WWB7 406 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
DDX54-205ENST00000548786 RCL1Q9Y2P8 373 aaKnown RBP11.66□□□□□ -0.54
DDX54-205ENST00000548786 C5orf51A6NDU8 294 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 MBPP02686 304 aaPredicted RBP11.65□□□□□ -0.54
DDX54-205ENST00000548786 FABP1P07148 127 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 METTL15P1P0C7V9 234 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.54
DDX54-205ENST00000548786 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
DDX54-205ENST00000548786 PAX9P55771 341 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 C12orf45Q8N5I9 185 aaPredicted RBP11.65□□□□□ -0.54
DDX54-205ENST00000548786 STPG3Q8N7X2 389 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 PPP1R14BQ96C90 147 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 TRGV9Q99603 122 aa11.65□□□□□ -0.54
DDX54-205ENST00000548786 LSM5Q9Y4Y9 91 aaKnown RBP11.65□□□□□ -0.54
DDX54-205ENST00000548786 HELTA6NFD8 242 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 K7EQG2 157 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
DDX54-205ENST00000548786 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
DDX54-205ENST00000548786 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
DDX54-205ENST00000548786 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
DDX54-205ENST00000548786 SNRPGP15A8MWD9 76 aa11.63□□□□□ -0.55
DDX54-205ENST00000548786 BUB3O43684 328 aa11.63□□□□□ -0.55
DDX54-205ENST00000548786 TMEM182Q6ZP80 229 aaPredicted RBP11.63□□□□□ -0.55
DDX54-205ENST00000548786 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
DDX54-205ENST00000548786 L7N2F9 121 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 SPRY2O43597 315 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 S100A10P60903 97 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 VAMP2P63027 116 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 NRARPQ7Z6K4 114 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 BATF3Q9NR55 127 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 DOK5Q9P104 306 aa11.62□□□□□ -0.55
DDX54-205ENST00000548786 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 PMS2P5A8MQ11 134 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 CA1P00915 261 aaPredicted RBP11.61□□□□□ -0.55
DDX54-205ENST00000548786 ORM2P19652 201 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 BCAP31P51572 246 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 STHQ8IWL8 128 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 KIR2DL5AQ8N109 375 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 OR1B1Q8NGR6 318 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 KIR2DL5BQ8NHK3 375 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 CSTL1Q9H114 145 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 NRN1Q9NPD7 142 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 TENM2Q9NT68 2774 aa11.61□□□□□ -0.55
DDX54-205ENST00000548786 K7EPK0 472 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 UBE2CO00762 179 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 TSC22D2O75157 780 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 AP2S1P53680 142 aaPredicted RBP11.6□□□□□ -0.55
DDX54-205ENST00000548786 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms