RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 BMPR1BO00238 502 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 LINC00869P0C866 280 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 FFAR4Q5NUL3 377 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 ALKAL2Q6UX46 152 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 ZNF600Q6ZNG1 722 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 C18orf65Q6ZTR6 163 aa22.17■■□□□ 1.14
BRF1-213ENST00000548421 GGCTO75223 188 aaKnown RBP22.16■■□□□ 1.14
BRF1-213ENST00000548421 ELLP55199 621 aaPredicted RBP22.16■■□□□ 1.14
BRF1-213ENST00000548421 KRTAP10-3P60369 221 aa22.16■■□□□ 1.14
BRF1-213ENST00000548421 HIST2H2BDQ6DRA6 164 aa22.16■■□□□ 1.14
BRF1-213ENST00000548421 OR51G1Q8NGK1 321 aa22.16■■□□□ 1.14
BRF1-213ENST00000548421 Q8WTZ3 238 aa22.16■■□□□ 1.14
BRF1-213ENST00000548421 NUDT19A8MXV4 375 aa22.15■■□□□ 1.14
BRF1-213ENST00000548421 Q6ZRG5 221 aa22.15■■□□□ 1.14
BRF1-213ENST00000548421 C19orf24Q9BVV8 132 aa22.15■■□□□ 1.14
BRF1-213ENST00000548421 ZNF680Q8NEM1 530 aa22.15■■□□□ 1.14
BRF1-213ENST00000548421 IGHV3-35A0A0C4DH35 117 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 YIF1AO95070 293 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 OR2C1O95371 312 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 IFNA7P01567 189 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 HSPB1P04792 205 aaKnown RBP22.14■■□□□ 1.13
BRF1-213ENST00000548421 AKR1C8PQ5T2L2 129 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 ZNF414Q96IQ9 312 aa22.14■■□□□ 1.13
BRF1-213ENST00000548421 PUS1Q9Y606 427 aaKnown RBP eCLIP22.14■■□□□ 1.13
BRF1-213ENST00000548421 MBP02144 154 aa22.13■■□□□ 1.13
BRF1-213ENST00000548421 IFITM2Q01629 132 aa22.13■■□□□ 1.13
BRF1-213ENST00000548421 IGHV4OR15-8A0A075B7B6 117 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 A0A087WW49 117 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 A0A1W2PRX2 142 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 UMAD1C9J7I0 102 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 IL4P05112 153 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 ACOT6Q3I5F7 207 aaPredicted RBP22.12■■□□□ 1.13
BRF1-213ENST00000548421 PXDC1Q5TGL8 231 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 RNF125Q96EQ8 232 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 PLA2G2EQ9NZK7 142 aa22.12■■□□□ 1.13
BRF1-213ENST00000548421 WI2-2373I1.2A0A1W2PRP0 233 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 PLP1P60201 277 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 LYZP61626 148 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 DEFB136Q30KP8 78 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 FAM74A1Q5RGS3 127 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 C8orf86Q6ZUL3 223 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 VSIRQ9H7M9 311 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 FBN1P35555 2871 aaKnown RBP22.11■■□□□ 1.13
BRF1-213ENST00000548421 TENM1Q9UKZ4 2725 aa22.11■■□□□ 1.13
BRF1-213ENST00000548421 NDUFA4O00483 81 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 M6PRP20645 277 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 RPEL1Q2QD12 228 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 TMEM41BQ5BJD5 291 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 GCSAMLQ5JQS6 135 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 TOMM20LQ6UXN7 152 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 OR1L4Q8NGR5 311 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 TMEM158Q8WZ71 300 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 UBQLN2Q9UHD9 624 aa22.1■■□□□ 1.13
BRF1-213ENST00000548421 ORM2P19652 201 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 SULT1A2P50226 295 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 RAB2AP61019 212 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 NDUFA11Q86Y39 141 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR11H1Q8NG94 326 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR1B1Q8NGR6 318 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 PFDN5Q99471 154 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 PBDC1Q9BVG4 233 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 ZFAND3Q9H8U3 227 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 DOK5Q9P104 306 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 LINC01619G3V211 115 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 COX7A2P2O60397 106 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 RAB5CP51148 216 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR10G4Q8NGN3 311 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR10G9Q8NGN4 311 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR10G7Q8NGN6 311 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 OR1N2Q8NGR9 330 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 DPF1Q92782 380 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 RPRMQ9NS64 109 aa22.09■■□□□ 1.13
BRF1-213ENST00000548421 HYPMO75409 117 aa22.08■■□□□ 1.12
BRF1-213ENST00000548421 ZP3P21754 424 aa22.08■■□□□ 1.12
BRF1-213ENST00000548421 ZNF767PQ75MW2 155 aa22.08■■□□□ 1.12
BRF1-213ENST00000548421 GPHB5Q86YW7 130 aa22.08■■□□□ 1.12
BRF1-213ENST00000548421 RNF141Q8WVD5 230 aa22.08■■□□□ 1.12
BRF1-213ENST00000548421 RCC1LQ96I51 464 aaKnown RBP22.08■■□□□ 1.12
BRF1-213ENST00000548421 ELOA3CA0A087WX78 387 aaPredicted RBP22.07■■□□□ 1.12
BRF1-213ENST00000548421 ADARB2-AS1A8MUL3 147 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 OR5G3P0C626 314 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 HOXD3P31249 432 aaPredicted RBP22.07■■□□□ 1.12
BRF1-213ENST00000548421 USF2Q15853 346 aaPredicted RBP22.07■■□□□ 1.12
BRF1-213ENST00000548421 FAM106AQ4KMX7 169 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 GATAD1Q8WUU5 269 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 TMEM37Q8WXS4 190 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 CITED1Q99966 193 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 DNAJC4Q9NNZ3 241 aa22.07■■□□□ 1.12
BRF1-213ENST00000548421 NSUN5P1Q3KNT7 163 aa22.06■■□□□ 1.12
BRF1-213ENST00000548421 C10orf113Q5VZT2 155 aa22.06■■□□□ 1.12
BRF1-213ENST00000548421 PATE2Q6UY27 113 aa22.06■■□□□ 1.12
BRF1-213ENST00000548421 DPPA3Q6W0C5 159 aa22.06■■□□□ 1.12
BRF1-213ENST00000548421 RPP25LQ8N5L8 163 aaKnown RBP22.05■■□□□ 1.12
BRF1-213ENST00000548421 TMEM190Q8WZ59 177 aa22.05■■□□□ 1.12
BRF1-213ENST00000548421 RAX2Q96IS3 184 aa22.05■■□□□ 1.12
BRF1-213ENST00000548421 HIGD1AQ9Y241 93 aa22.05■■□□□ 1.12
BRF1-213ENST00000548421 IGHV3OR16-8A0A075B7F1 116 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 FAM122CQ6P4D5 195 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 UNQ9165/PRO28630Q6UXU0 137 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 FAM213BQ8TBF2 198 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms