RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RABL2AQ9UBK7 228 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 RABL2BQ9UNT1 228 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 HELTA6NFD8 242 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 H3BMQ9 156 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 IL4P05112 153 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 HNRNPCP07910 306 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCAF11-211ENST00000547950 ANXA3P12429 323 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 CCR6P51684 374 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 SUPT4H1P63272 117 aaKnown RBP4.89□□□□□ -1.63
SCAF11-211ENST00000547950 SMCO1Q147U7 214 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 USF2Q15853 346 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-211ENST00000547950 PYDC2Q56P42 97 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 NMSQ5H8A3 153 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 PSMG4Q5JS54 123 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 C16orf54Q6UWD8 224 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 TMED4Q7Z7H5 227 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 LGI3Q8N145 548 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 OR51G1Q8NGK1 321 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 OR1S1Q8NH92 325 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 TMEM170AQ8WVE7 144 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 IL22RA2Q969J5 263 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 SOSTQ9BQB4 213 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 SLIRPQ9GZT3 109 aaKnown RBP4.89□□□□□ -1.63
SCAF11-211ENST00000547950 MFFQ9GZY8 342 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 RBKSQ9H477 322 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 CLEC5AQ9NY25 188 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 CACFD1Q9UGQ2 172 aa4.89□□□□□ -1.63
SCAF11-211ENST00000547950 A0A0B4J2A0 478 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 CCDC160A6NGH7 325 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 DEDDO75618 318 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 GIG44P09565 113 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 RBMY1A1P0DJD3 496 aaKnown RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 RBMY1CP0DJD4 496 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 PSG1P11464 419 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 AP2S1P53680 142 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 RBMY1FQ15415 496 aaKnown RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 TRPT1Q86TN4 253 aaKnown RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 TOMM5Q8N4H5 51 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 RPP25LQ8N5L8 163 aaKnown RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 DCANP1Q8TF63 244 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 BCL7BQ9BQE9 202 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 PBDC1Q9BVG4 233 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 HSPB7Q9UBY9 170 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 SHPKQ9UHJ6 478 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 PAIP2BQ9ULR5 123 aaKnown RBP4.88□□□□□ -1.63
SCAF11-211ENST00000547950 U3KQ87 197 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 STARD9Q9P2P6 4700 aa4.88□□□□□ -1.63
SCAF11-211ENST00000547950 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 ZFP92A6NM28 416 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 IGLL5B9A064 214 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 BUB3O43684 328 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 TOMM40O96008 361 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 IGKV3-20P01619 116 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 SPP1P10451 314 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 IAPPP10997 89 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 C4BPBP20851 252 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 VAMP1P23763 118 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 FAUP35544 74 aaKnown RBP4.87□□□□□ -1.63
SCAF11-211ENST00000547950 GPX4P36969 197 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-211ENST00000547950 SNRPD3P62318 126 aaKnown RBP4.87□□□□□ -1.63
SCAF11-211ENST00000547950 SRPXP78539 464 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 ZNF90Q03938 601 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 OR2F1Q13607 317 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 GAMTQ14353 236 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 TMEM41BQ5BJD5 291 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 GSG1LQ6UXU4 331 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 CENPSQ8N2Z9 138 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 C2CD4CQ8TF44 421 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 C11orf68Q9H3H3 251 aaKnown RBP4.87□□□□□ -1.63
SCAF11-211ENST00000547950 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 XCL2Q9UBD3 114 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 TBC1D24Q9ULP9 559 aa4.87□□□□□ -1.63
SCAF11-211ENST00000547950 SNRPGP15A8MWD9 76 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 FAM90A26D6RGX4 464 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 MIFP14174 115 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 HLA-DMBP28068 263 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 S100A5P33763 92 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 ATP5IP56385 69 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-211ENST00000547950 AP3S2P59780 193 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 LYZP61626 148 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 NUTF2P61970 127 aaKnown RBP4.86□□□□□ -1.63
SCAF11-211ENST00000547950 RAB11AP62491 216 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 TMEM128Q5BJH2 165 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 LGALS9CQ6DKI2 356 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 SIGLEC15Q6ZMC9 328 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 Q8NAQ8 132 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 PPP1R14BQ96C90 147 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 RNF125Q96EQ8 232 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 SLC35E1Q96K37 410 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 LINC00052Q96N35 136 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 MAGT1Q9H0U3 335 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
SCAF11-211ENST00000547950 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
SCAF11-211ENST00000547950 IGKV1D-37A0A075B6S9 117 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms