RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ASB17Q8WXJ9 295 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 TAMM41Q96BW9 452 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 MS4A6EQ96DS6 147 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 SMIM19Q96E16 107 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 SLC35G5Q96KT7 338 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 C2orf50Q96LR7 162 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 KCTD7Q96MP8 289 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 C7orf50Q9BRJ6 194 aaKnown RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 LLPHQ9BRT6 129 aaKnown RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 DDA1Q9BW61 102 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 NKX6-2Q9C056 277 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 XPNPEP1Q9NQW7 623 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 NRBP2Q9NSY0 501 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PARVAQ9NVD7 372 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LSM5Q9Y4Y9 91 aaKnown RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 POLR3HQ9Y535 204 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 ARL5AQ9Y689 179 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 NRXN2Q9P2S2 1712 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 ANKRD50Q9ULJ7 1429 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 GREB1Q4ZG55 1949 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 USF3Q68DE3 2245 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 DLEC1Q9Y238 1755 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TRAV8-1A0A0A6YYK1 113 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 IGHV1-69-2A0A0G2JMI3 117 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TMEM269A0A1B0GVZ9 245 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 PQLC2LA1A4F0 135 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 GRIFINA4D1Z8 144 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C5orf49A4QMS7 147 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 OR5K4A6NMS3 321 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 H3BQV1 296 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 M0QYV0 167 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 GPR171O14626 319 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 BIRC5O15392 142 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 MPZL2O60487 215 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 PFDN1O60925 122 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 BRI3O95415 125 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 HAND1O96004 215 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 SERPINA1P01009 418 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 IFNA5P01569 189 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 IFNA6P05013 189 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 IFNA16P05015 189 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CD7P09564 240 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 HIST1H1EP10412 219 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 HLA-EP13747 358 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 NPPCP23582 126 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 MSNP26038 577 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 HSD11B1P28845 292 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 OR1E2P47887 323 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 MT4P47944 62 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 MARCKSL1P49006 195 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CDC34P49427 236 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 SULT1A1P50225 295 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 LINC00313P59037 77 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 UBE2G2P60604 165 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 ERVS71-1P61550 626 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 VBP1P61758 197 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 HIST1H4AP62805 103 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 RPS24P62847 133 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 FKBP1AP62942 108 aaKnown RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 DR1Q01658 176 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 EMX1Q04741 257 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 MLLT11Q13015 90 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 GNA13Q14344 377 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 ZNHIT3Q15649 155 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 GUK1Q16774 197 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 HLA-DRB5Q30154 266 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TMEM97Q5BJF2 176 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TEX36Q5VZQ5 186 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C5orf46Q6UWT4 87 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TMED4Q7Z7H5 227 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 STX12Q86Y82 276 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C20orf196Q8IYI0 205 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 BLIDQ8IZY5 108 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 OR1M1Q8NGA1 313 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 OR51D1Q8NGF3 324 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 EEF1AKMT1Q8WVE0 214 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 DYDC1Q8WWB3 177 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CYGBQ8WWM9 190 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 ASB13Q8WXK3 278 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 ANKRD7Q92527 254 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 BORCS7Q96B45 105 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 ROPN1LQ96C74 230 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TLCD1Q96CP7 247 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CPNE2Q96FN4 548 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 TMEM70Q9BUB7 260 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C9orf16Q9BUW7 83 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CCDC94Q9BW85 323 aaPredicted RBP0.34□□□□□ -2.36
CEP290-204ENST00000547926 GNB1LQ9BYB4 327 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 PRRG3Q9BZD7 231 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C20orf27Q9GZN8 174 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 CHST5Q9GZS9 411 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 TLNRD1Q9H1K6 362 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 XAGE1AQ9HD64 81 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 VPS29Q9UBQ0 182 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 STOML2Q9UJZ1 356 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 C3orf18Q9UK00 162 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 HHLA2Q9UM44 414 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 GUCA1BQ9UMX6 200 aa0.34□□□□□ -2.36
CEP290-204ENST00000547926 POLR1DQ9Y2S0 133 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms