RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 THAP8Q8NA92 274 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 TMEM37Q8WXS4 190 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 TMEM167BQ9NRX6 74 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 DOK5Q9P104 306 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 MINOS1-NBL1R4GNA1 71 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 FCN1O00602 326 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 MFAP2P55001 183 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 RNF2Q99496 336 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 DERL1Q9BUN8 251 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 DNAJC4Q9NNZ3 241 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
CHMP1A-204ENST00000547687 IGKV1D-37A0A075B6S9 117 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 SCO2A0A1W2PP80 73 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 CRYGCP07315 174 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 PQLC2Q6ZP29 291 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 OR1P1Q8NH06 330 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 SLC25A33Q9BSK2 321 aa13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
CHMP1A-204ENST00000547687 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 PSMB11A5LHX3 300 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 H7BYZ3 331 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 C8orf88P0DMB2 117 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 ZNF90Q03938 601 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 OR5T1Q8NG75 326 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 ZNF503Q96F45 646 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 C5orf52A6NGY3 159 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 OOSP1A8MZH6 123 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 OR7C2O60412 319 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 SAA4P35542 130 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 AKR1D1P51857 326 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 SELENOTP62341 195 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 MMDQ15546 238 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 CCDC144NLQ6NUI1 221 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 C19orf35Q6ZS72 473 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 LINC01551Q86U37 167 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
CHMP1A-204ENST00000547687 TRAV20A0A0B4J274 112 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 CORTO00230 105 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 COX7A2P2O60397 106 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 MOSP00540 346 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 RPL35P42766 123 aaKnown RBP13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 OR1L4Q8NGR5 311 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 PFDN5Q99471 154 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 C12orf57Q99622 126 aa13.09□□□□□ -0.31
CHMP1A-204ENST00000547687 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 NBR2O15453 112 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 CNIH1O95406 144 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 PFN1P07737 140 aaKnown RBP13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 NECAP1Q8NC96 275 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 C22orf15Q8WYQ4 148 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.31
CHMP1A-204ENST00000547687 TRAV5A0A0B4J249 113 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 NPFFO15130 113 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 S100PP25815 95 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 GALR1P47211 349 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 HES1Q14469 280 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 ZNF124Q15973 351 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 NPBQ8NG41 125 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-204ENST00000547687 IGHV3OR16-10A0A075B7F0 116 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 OR10J4P0C629 311 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 BPIFB3P59826 476 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 MORN5Q5VZ52 161 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 PATE2Q6UY27 113 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
CHMP1A-204ENST00000547687 IGHV3-21A0A0B4J1V1 117 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TRAV40A0A0B4J280 105 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TRGV9Q99603 122 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TENM1Q9UKZ4 2725 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 UBE2CO00762 179 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TGOLN2O43493 480 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 NDUFA3O95167 84 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 TRGC2P03986 189 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 ANKRD39Q53RE8 183 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 OR2T10Q8NGZ9 312 aa13.06□□□□□ -0.32
CHMP1A-204ENST00000547687 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms