RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 FOXE3Q13461 319 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 SLC25A34Q6PIV7 304 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
BRF1-211ENST00000547530 COL4A2P08572 1712 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 CYC1P08574 325 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 PRR20EP86478 221 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 PRR20CP86479 221 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 PRR20DP86480 221 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 PRR20BP86481 221 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 PRR20AP86496 221 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 IGFL4Q6B9Z1 124 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 RITA1Q96K30 269 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 TECTAO75443 2155 aa12.32□□□□□ -0.44
BRF1-211ENST00000547530 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 VWC2LB2RUY7 222 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 C9JCJ5 164 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
BRF1-211ENST00000547530 IGLV2-8P01709 118 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
BRF1-211ENST00000547530 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
BRF1-211ENST00000547530 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
BRF1-211ENST00000547530 LYNX1G3V0Z9 82 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 SAP30O75446 220 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 CNIH1O95406 144 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 LYNX1P0DP58 116 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 EIF4EBP1Q13541 118 aaPredicted RBP12.3□□□□□ -0.44
BRF1-211ENST00000547530 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 TXNDC17Q9BRA2 123 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 UPK2O00526 184 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 CNTFRP26992 372 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 FCER1GP30273 86 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 CTRLP40313 264 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 GAGE1Q13065 139 aa12.3□□□□□ -0.44
BRF1-211ENST00000547530 KLF17Q5JT82 389 aaPredicted RBP12.3□□□□□ -0.44
BRF1-211ENST00000547530 COL5A1P20908 1838 aaPredicted RBP12.3□□□□□ -0.44
BRF1-211ENST00000547530 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
BRF1-211ENST00000547530 ACP1P24666 158 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 ARF6P62330 175 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 CD69Q07108 199 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 OR1L8Q8NGR8 309 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 LOC105371242A0A075B767 164 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 RNASE2P10153 161 aaKnown RBP12.29□□□□□ -0.44
BRF1-211ENST00000547530 BPIFB3P59826 476 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 WT1-ASQ06250 92 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 RNF7Q9UBF6 113 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 RPUSD1Q9UJJ7 312 aaKnown RBP12.29□□□□□ -0.44
BRF1-211ENST00000547530 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 HBBP68871 147 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 C22orf34Q6ZV56 151 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 S100A7AQ86SG5 101 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 MTURNQ8N3F0 131 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
BRF1-211ENST00000547530 TNRC6AQ8NDV7 1962 aaKnown RBP12.28□□□□□ -0.44
BRF1-211ENST00000547530 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 H3BUT2 72 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 M0R3E3 92 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
BRF1-211ENST00000547530 RBX1P62877 108 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 TRIP6Q15654 476 aaKnown RBP12.28□□□□□ -0.44
BRF1-211ENST00000547530 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 TMEM191AQ9H0A3 160 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 SLC25A10Q9UBX3 287 aaPredicted RBP12.28□□□□□ -0.44
BRF1-211ENST00000547530 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 PATE2Q6UY27 113 aa12.28□□□□□ -0.44
BRF1-211ENST00000547530 ZNF430Q9H8G1 570 aaPredicted RBP12.28□□□□□ -0.44
BRF1-211ENST00000547530 IGHV1-24A0A0C4DH33 117 aa12.27□□□□□ -0.44
BRF1-211ENST00000547530 J3KRW8 73 aa12.27□□□□□ -0.44
BRF1-211ENST00000547530 PRCDQ00LT1 54 aa12.27□□□□□ -0.44
BRF1-211ENST00000547530 ZNF329Q86UD4 541 aa12.27□□□□□ -0.44
BRF1-211ENST00000547530 IGF2RP11717 2491 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 FAM106CPP0CH98 169 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 FAM106AQ4KMX7 169 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 TTTY13Q9BZ97 58 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 MEGF9Q9H1U4 602 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 THYN1Q9P016 225 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 GAGE10A6NGK3 116 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 SYS1-DBNDD2H3BUS1 97 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 GRAMD2BQ96HH9 432 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 EPDR1Q9UM22 224 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 ZNF257Q9Y2Q1 563 aa12.27□□□□□ -0.45
BRF1-211ENST00000547530 ANKHD1Q8IWZ3 2542 aaKnown RBP12.26□□□□□ -0.45
BRF1-211ENST00000547530 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 NCR2O95944 276 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 PSG9Q00887 426 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 HES1Q14469 280 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 SFTA2Q6UW10 78 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 A8MWL6 223 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 DLL1O00548 723 aa12.26□□□□□ -0.45
BRF1-211ENST00000547530 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms