RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 A0A0U1RQK1 487 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 ZNF320A2RRD8 509 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 IGKV1-17P01599 117 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 MYCNOSP40205 109 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 ASPHD1Q5U4P2 390 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 CDC42EP3Q9UKI2 254 aa14.74□□□□□ -0.05
VDR-204ENST00000547065 TRAV30A0A087WSZ9 112 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 GCGP01275 180 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 NBEAP1P0C6P0 100 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 CNN1P51911 297 aaKnown RBP14.73□□□□□ -0.05
VDR-204ENST00000547065 ERVFC1-1P60608 527 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 LYZP61626 148 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 IGF2BP2-AS1Q96M15 143 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 PIMREGQ9BSJ6 248 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 IGLV11-55A0A075B6I3 123 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 PEX7O00628 323 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 SMIM6P0DI80 62 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 ACTL10Q5JWF8 245 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 FAM168AQ92567 244 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 FANCD2OSQ96PS1 177 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 OSTCQ9NRP0 149 aa14.73□□□□□ -0.05
VDR-204ENST00000547065 MRPL27Q9P0M9 148 aaKnown RBP14.73□□□□□ -0.05
VDR-204ENST00000547065 NPFFO15130 113 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 IGLV2-8P01709 118 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 GP9P14770 177 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 SAA4P35542 130 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 RANP62826 216 aaKnown RBP14.72□□□□□ -0.05
VDR-204ENST00000547065 OR5I1Q13606 314 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 FAM120AOSQ5T036 256 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 Q8N9W7 124 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 ZNF48Q96MX3 618 aaPredicted RBP14.72□□□□□ -0.05
VDR-204ENST00000547065 SPOCK3Q9BQ16 436 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 TMEM14CQ9P0S9 112 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 PITPNC1Q9UKF7 332 aa14.72□□□□□ -0.05
VDR-204ENST00000547065 NDUFS8O00217 210 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 ISLRO14498 428 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 TOMM40O96008 361 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 MFAP4P55083 255 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 PAX8Q06710 450 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 KLF17Q5JT82 389 aaPredicted RBP14.71□□□□□ -0.05
VDR-204ENST00000547065 BLNKQ8WV28 456 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 SLC25A39Q9BZJ4 359 aaPredicted RBP14.71□□□□□ -0.05
VDR-204ENST00000547065 THYN1Q9P016 225 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 EPDR1Q9UM22 224 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 V9GYV3 84 aa14.71□□□□□ -0.05
VDR-204ENST00000547065 SLC17A3O00476 420 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 NDPQ00604 133 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 C10orf105Q8TEF2 133 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 TACC2O95359 2948 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 IGHV7-81A0A0B4J1V7 117 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 PGPA6NDG6 321 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 HLA-DRB1P01911 266 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 EGR2P11161 476 aaPredicted RBP14.7□□□□□ -0.06
VDR-204ENST00000547065 YPEL3P61236 119 aaPredicted RBP14.7□□□□□ -0.06
VDR-204ENST00000547065 RPL15P61313 204 aaKnown RBP14.7□□□□□ -0.06
VDR-204ENST00000547065 RPEL1Q2QD12 228 aa14.7□□□□□ -0.06
VDR-204ENST00000547065 CENPVL3A0A0U1RRI6 287 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 IFITM10A6NMD0 228 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 SLC25A5P05141 298 aaKnown RBP14.69□□□□□ -0.06
VDR-204ENST00000547065 S100A2P29034 98 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 ZNF600Q6ZNG1 722 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 HIST3H2BBQ8N257 126 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 LINC00479Q96M42 142 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 TMEM68Q96MH6 324 aa14.69□□□□□ -0.06
VDR-204ENST00000547065 GAR1Q9NY12 217 aaKnown RBP14.69□□□□□ -0.06
VDR-204ENST00000547065 VWC2LB2RUY7 222 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 GNG7O60262 68 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 HIST1H1EP10412 219 aaKnown RBP14.68□□□□□ -0.06
VDR-204ENST00000547065 MGST1P10620 155 aaKnown RBP14.68□□□□□ -0.06
VDR-204ENST00000547065 LEMD1Q68G75 181 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 CLEC2AQ6UVW9 174 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 S100A7AQ86SG5 101 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 BAGE2Q86Y30 109 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 SHANK2-AS3Q9BTD1 123 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 RNF24Q9Y225 148 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 TRAPPC1Q9Y5R8 145 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 WI2-2373I1.2A0A1W2PRP0 233 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 SNRPCP09234 159 aaKnown RBP14.68□□□□□ -0.06
VDR-204ENST00000547065 TMEM183BQ1AE95 376 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 ZNF491Q8N8L2 437 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 TMEM190Q8WZ59 177 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 KLF12Q9Y4X4 402 aa14.68□□□□□ -0.06
VDR-204ENST00000547065 IGHV4-61A0A0C4DH41 118 aa14.67□□□□□ -0.06
VDR-204ENST00000547065 HIST1H1BP16401 226 aaKnown RBP14.67□□□□□ -0.06
VDR-204ENST00000547065 ATP5J2P56134 94 aa14.67□□□□□ -0.06
VDR-204ENST00000547065 COA6Q5JTJ3 125 aaKnown RBP14.67□□□□□ -0.06
VDR-204ENST00000547065 GFI1BQ5VTD9 330 aa14.67□□□□□ -0.06
VDR-204ENST00000547065 C5orf17Q8NAS9 161 aa14.67□□□□□ -0.06
VDR-204ENST00000547065 RNASE7Q9H1E1 156 aaKnown RBP14.67□□□□□ -0.06
VDR-204ENST00000547065 C21orf62Q9NYP8 219 aa14.67□□□□□ -0.06
VDR-204ENST00000547065 NDUFB8O95169 186 aa14.66□□□□□ -0.06
VDR-204ENST00000547065 RPL19P84098 196 aaKnown RBP14.66□□□□□ -0.06
VDR-204ENST00000547065 IBA57Q5T440 356 aaKnown RBP14.66□□□□□ -0.06
VDR-204ENST00000547065 RNF125Q96EQ8 232 aa14.66□□□□□ -0.06
VDR-204ENST00000547065 Q9H3A6 140 aa14.66□□□□□ -0.06
VDR-204ENST00000547065 OTORQ9NRC9 128 aa14.66□□□□□ -0.06
VDR-204ENST00000547065 TRAV34A0A0B4J273 112 aa14.65□□□□□ -0.06
VDR-204ENST00000547065 XKRY2A2RUG3 117 aa14.65□□□□□ -0.06
VDR-204ENST00000547065 H3BRN7 92 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms