RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
BRF1-209ENST00000547052 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
BRF1-209ENST00000547052 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
BRF1-209ENST00000547052 LYZP61626 148 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 ZNF546Q86UE3 836 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 OR11H7Q8NGC8 314 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 RNF125Q96EQ8 232 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 PBDC1Q9BVG4 233 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 OR5AC2Q9NZP5 309 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 RNF24Q9Y225 148 aa13.6□□□□□ -0.23
BRF1-209ENST00000547052 DNHD1Q96M86 4753 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 PMS2P5A8MQ11 134 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 PSG1P11464 419 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 PAFAH1B2P68402 229 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 IL34Q6ZMJ4 242 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 ZFAND3Q9H8U3 227 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 SMPXQ9UHP9 88 aa13.59□□□□□ -0.23
BRF1-209ENST00000547052 IGSF23A1L1A6 192 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 CCNKO75909 580 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 DFFBO76075 338 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 C8orf88P0DMB2 117 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 GP9P14770 177 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 DEFA6Q01524 100 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 EWSR1Q01844 656 aaKnown RBP eCLIP13.58□□□□□ -0.24
BRF1-209ENST00000547052 OR2F1Q13607 317 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 DEFB114Q30KQ6 69 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 CD300EQ496F6 205 aaPredicted RBP13.58□□□□□ -0.24
BRF1-209ENST00000547052 CYP2G1PQ6ZSU1 146 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 INO80EQ8NBZ0 244 aaPredicted RBP13.58□□□□□ -0.24
BRF1-209ENST00000547052 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 KCNIP2Q9NS61 270 aa13.58□□□□□ -0.24
BRF1-209ENST00000547052 UBE2L5PA0A1B0GUS4 154 aa13.57□□□□□ -0.24
BRF1-209ENST00000547052 MPDU1O75352 247 aa13.57□□□□□ -0.24
BRF1-209ENST00000547052 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
BRF1-209ENST00000547052 RPL11P62913 178 aaKnown RBP13.57□□□□□ -0.24
BRF1-209ENST00000547052 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
BRF1-209ENST00000547052 OR5C1Q8NGR4 320 aa13.57□□□□□ -0.24
BRF1-209ENST00000547052 HELTA6NFD8 242 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 ZNF90Q03938 601 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 PXDC1Q5TGL8 231 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 ZNF709Q8N972 641 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 OR2T35Q8NGX2 323 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 FBXL17Q9UF56 701 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 MLXQ9UH92 298 aa13.56□□□□□ -0.24
BRF1-209ENST00000547052 IGHV3-49A0A0A0MS15 119 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 CHEK1O14757 476 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 IFNA5P01569 189 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 FGF7P21781 194 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 CRYBB3P26998 211 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 CAMLGP49069 296 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 AP2S1P53680 142 aaPredicted RBP13.55□□□□□ -0.24
BRF1-209ENST00000547052 Q6ZRG5 221 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 WDR89Q96FK6 387 aaPredicted RBP13.55□□□□□ -0.24
BRF1-209ENST00000547052 SPAG8Q99932 426 aaPredicted RBP13.55□□□□□ -0.24
BRF1-209ENST00000547052 AURKAIP1Q9NWT8 199 aaPredicted RBP13.55□□□□□ -0.24
BRF1-209ENST00000547052 SLC45A2Q9UMX9 530 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 HSPB11Q9Y547 144 aa13.55□□□□□ -0.24
BRF1-209ENST00000547052 IGKV1D-37A0A075B6S9 117 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 FXYD6-FXYD2A0A087WZ82 144 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 WI2-2373I1.2A0A1W2PRP0 233 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 H0YIZ8 118 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 DNASE2O00115 360 aaPredicted RBP13.54□□□□□ -0.24
BRF1-209ENST00000547052 LINC00869P0C866 280 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 NHLH2Q02577 135 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 CLINT1Q14677 625 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 TMEM61Q8N0U2 210 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 OR1B1Q8NGR6 318 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 MRAPQ8TCY5 172 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 PRR25Q96S07 402 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 ATP5SQ99766 215 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 RNF126Q9BV68 326 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 CMYA5Q8N3K9 4069 aa13.54□□□□□ -0.24
BRF1-209ENST00000547052 IGKV1OR2-108A0A075B7D4 117 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 IGHV3OR16-13A0A075B7E8 117 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 IGHV3-74A0A0B4J1X5 117 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 AGPAT2O15120 278 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 HYPMO75409 117 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 OR5G3P0C626 314 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 LYL1P12980 280 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 ORM2P19652 201 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 CMC4P56277 68 aaPredicted RBP13.53□□□□□ -0.24
BRF1-209ENST00000547052 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 VWC2Q2TAL6 325 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 TCF24Q7RTU0 167 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 ST8SIA2Q92186 375 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 VSIRQ9H7M9 311 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 HIGD1AQ9Y241 93 aa13.53□□□□□ -0.24
BRF1-209ENST00000547052 TSPAN4O14817 238 aa13.52□□□□□ -0.25
BRF1-209ENST00000547052 CD81P60033 236 aa13.52□□□□□ -0.25
BRF1-209ENST00000547052 ZNF266Q14584 549 aa13.52□□□□□ -0.25
BRF1-209ENST00000547052 USF2Q15853 346 aaPredicted RBP13.52□□□□□ -0.25
BRF1-209ENST00000547052 ADAMTSL5Q6ZMM2 481 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms