RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 FBXL17Q9UF56 701 aa6.18□□□□□ -1.42
USP28-215ENST00000545608 SCP2D1Q9UJQ7 156 aa6.18□□□□□ -1.42
USP28-215ENST00000545608 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 C3orf85A0A1B0GTC6 90 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 PLA2G10O15496 165 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 PRAF2O60831 178 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 IFNA17P01571 189 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 CD3DP04234 171 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 CD5P06127 495 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 GIG44P09565 113 aaPredicted RBP6.17□□□□□ -1.42
USP28-215ENST00000545608 SNCAP37840 140 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 AKR1C2P52895 323 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 B2MP61769 119 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 FLI1Q01543 452 aaPredicted RBP6.17□□□□□ -1.42
USP28-215ENST00000545608 TMEM187Q14656 261 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
USP28-215ENST00000545608 RNASE10Q5GAN6 216 aaKnown RBP6.17□□□□□ -1.42
USP28-215ENST00000545608 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 Q6ZRM9 215 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 SLC35G3Q8N808 338 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 OR4D10Q8NGI6 311 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 ABHD1Q96SE0 405 aa6.17□□□□□ -1.42
USP28-215ENST00000545608 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
USP28-215ENST00000545608 C7orf66A4D0T2 115 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 K7EQG2 157 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 CLN5O75503 358 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 IFNA4P05014 189 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 NPPCP23582 126 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 HOXA1P49639 335 aaPredicted RBP6.16□□□□□ -1.42
USP28-215ENST00000545608 SUB1P53999 127 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP28-215ENST00000545608 ARRDC1Q8N5I2 433 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 PDCD10Q9BUL8 212 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 MFFQ9GZY8 342 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 MIXL1Q9H2W2 232 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 EXTL2Q9UBQ6 330 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 MTFP1Q9UDX5 166 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 RABAC1Q9UI14 185 aa6.16□□□□□ -1.42
USP28-215ENST00000545608 A0A1W2PS18 150 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 CORTO00230 105 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 SSNA1O43805 119 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 ATG12O94817 140 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 IGKV1-17P01599 117 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
USP28-215ENST00000545608 CD74P04233 296 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
USP28-215ENST00000545608 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 UCP1P25874 307 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 CRYBB3P26998 211 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 OPRK1P41145 380 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 P2RY1P47900 373 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 AP3S2P59780 193 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
USP28-215ENST00000545608 BSXQ3C1V8 233 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TIGITQ495A1 244 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 GAGE13Q4V321 117 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.42
USP28-215ENST00000545608 STHQ8IWL8 128 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 Q8NAQ8 132 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TMEM229BQ8NBD8 167 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 OR13C8Q8NGS7 320 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TERB2Q8NHR7 220 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 MARCH1Q8TCQ1 289 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TMEM230Q96A57 120 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 RRNAD1Q96FB5 475 aaKnown RBP6.15□□□□□ -1.42
USP28-215ENST00000545608 METTL26Q96S19 204 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 SOSTQ9BQB4 213 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 TMEM231Q9H6L2 316 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 ENY2Q9NPA8 101 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
USP28-215ENST00000545608 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 NAP1L6A6NFF2 107 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 CDS2O95674 445 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 RAB3DO95716 219 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 OR5AC1P0C628 307 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 ZNF688P0C7X2 276 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 TBPP20226 339 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 SPCS3P61009 180 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 SCGB2B2Q4G0G5 96 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 AARDQ4LEZ3 155 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 FAAP20Q6NZ36 180 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 STEAP1BQ6NZ63 245 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 LINC00518Q8N0U6 118 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 CCDC71LQ8N9Z2 235 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 RNASE11Q8TAA1 199 aaKnown RBP6.14□□□□□ -1.43
USP28-215ENST00000545608 C2CD4CQ8TF44 421 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 DCANP1Q8TF63 244 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 GLYATL2Q8WU03 294 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 C15orf40Q8WUR7 153 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 ASB13Q8WXK3 278 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 GPR146Q96CH1 333 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 GRAMD2BQ96HH9 432 aa6.14□□□□□ -1.43
USP28-215ENST00000545608 RTBDNQ9BSG5 229 aaPredicted RBP6.14□□□□□ -1.43
USP28-215ENST00000545608 GPN1Q9HCN4 374 aaPredicted RBP6.14□□□□□ -1.43
USP28-215ENST00000545608 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms