RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 AMN1Q8IY45 258 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 SLC22A24Q8N4F4 322 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 ZNRF2Q8NHG8 242 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 TAMM41Q96BW9 452 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 PPP1R14BQ96C90 147 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 SMIM19Q96E16 107 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 OR7D2Q96RA2 312 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 PARD6GQ9BYG4 376 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF230Q9UIE0 474 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 IGHV3-21A0A0B4J1V1 117 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 METTL15A6NJ78 407 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 FAM159BA6NKW6 160 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 A8MWP4 228 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 RBBP9O75884 186 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 DBIP07108 87 aaKnown RBP2.28□□□□□ -2.04
SNHG1-222ENST00000545308 NEFHP12036 1026 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 PTHLHP12272 177 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 NQO1P15559 274 aaKnown RBP2.28□□□□□ -2.04
SNHG1-222ENST00000545308 CELP19835 753 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 INSL3P51460 131 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 FMODQ06828 376 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 SMAGPQ0VAQ4 97 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 CENPWQ5EE01 88 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM69Q5SWH9 247 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 DNLZQ5SXM8 178 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 C1orf140Q5VVS0 124 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 FAM19A5Q7Z5A7 132 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-222ENST00000545308 SGPP2Q8IWX5 399 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 C20orf196Q8IYI0 205 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 OR5D18Q8NGL1 313 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 SLC35B4Q969S0 331 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 ISOC1Q96CN7 298 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF2Q9BSG1 426 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-222ENST00000545308 SLC22A4Q9H015 551 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 TXNIPQ9H3M7 391 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 GLS2Q9UI32 602 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
SNHG1-222ENST00000545308 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 TRAV36DV7A0A075B6V5 113 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 TCRBV4S1A1TA0A5B7 111 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 LEUTXA8MZ59 168 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 AZIN1O14977 448 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 NPFFO15130 113 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 BANF1O75531 89 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 IGKV1D-33P01593 117 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 IGKV1-33P01594 117 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 IGHG2P01859 326 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 S100A6P06703 90 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 RPS17P08708 135 aaKnown RBP2.27□□□□□ -2.05
SNHG1-222ENST00000545308 PRPS1L1P21108 318 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 INPP1P49441 399 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 ARF6P62330 175 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 CASP8Q14790 479 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 UAP1Q16222 522 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-222ENST00000545308 LRRC75BQ2VPJ9 315 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 KRTAP13-2Q52LG2 175 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SPATA31B1PQ5VZV4 182 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 TMEM136Q6ZRR5 245 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SLC36A1Q7Z2H8 476 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 H1FOOQ8IZA3 346 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-222ENST00000545308 RNF182Q8N6D2 247 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SLC25A40Q8TBP6 338 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 DEDD2Q8WXF8 326 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 ROPN1LQ96C74 230 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 RMI2Q96E14 147 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SLC25A44Q96H78 314 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SLC35G5Q96KT7 338 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 PPP3R2Q96LZ3 170 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 KCTD7Q96MP8 289 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 CCDC115Q96NT0 180 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 OR2V2Q96R30 315 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SEC22CQ9BRL7 303 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 SCRT1Q9BWW7 348 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 MRPS26Q9BYN8 205 aaKnown RBP2.27□□□□□ -2.05
SNHG1-222ENST00000545308 OR2J1Q9GZK6 312 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 ARL6Q9H0F7 186 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 MS4A6AQ9H2W1 248 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 OR51B6Q9H340 312 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 GLTPQ9NZD2 209 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
SNHG1-222ENST00000545308 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 EXOC1LA0A1B0GW35 172 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 C5orf49A4QMS7 147 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 OR5H14A6NHG9 310 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 ZNF729A6NN14 1252 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 B4DEV8 164 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 H3BUX3 64 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 M0R1W7 72 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 KRT75O95678 551 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 LTAP01374 205 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 PSMA1P25786 263 aaKnown RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 CD34P28906 385 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 IFNGR2P38484 337 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 GABARAPL2P60520 117 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 DR1Q01658 176 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms