RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 OR8I2Q8N0Y5 310 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 IDI2-AS1Q9NZ38 188 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 C15orf61A6NNL5 157 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 ACTL6BO94805 426 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 CCL3L1P16619 93 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 CX3CL1P78423 397 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
CHFR-223ENST00000544268 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 PDLIM3Q53GG5 364 aaPredicted RBP12.12□□□□□ -0.47
CHFR-223ENST00000544268 AMMECR1LQ6DCA0 310 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 ERASQ7Z444 233 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
CHFR-223ENST00000544268 V9GYV3 84 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 C19orf84I3L1E1 186 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 J3QR06 171 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 CORTO00230 105 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 IGFBP2P18065 325 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 SRIP30626 198 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 DIAPH2-AS1Q14236 149 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 SAMD13Q5VXD3 122 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 DEFB125Q8N687 156 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 CCL17Q92583 94 aa12.12□□□□□ -0.47
CHFR-223ENST00000544268 ZNF462Q96JM2 2506 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 TRGV10A0A0A0MS01 117 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 OR2T8A6NH00 312 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 C9JCJ5 164 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 CT45A6P0DMU7 189 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 CT45A5P0DMU8 189 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 CT45A7P0DMV0 189 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 NTF3P20783 257 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 CRYBA4P53673 196 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 DLX1P56177 255 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 BMPR1BO00238 502 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 STPG3Q8N7X2 389 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
CHFR-223ENST00000544268 IGKV1OR2-108A0A075B7D4 117 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 LINC00869P0C866 280 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 TEX36Q5VZQ5 186 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
CHFR-223ENST00000544268 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
CHFR-223ENST00000544268 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
CHFR-223ENST00000544268 E7EUB6 86 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 IGHV3-48P01763 117 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 NPY1RP25929 384 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 OPRK1P41145 380 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 ZNF788Q6ZQV5 615 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
CHFR-223ENST00000544268 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 WASHC3Q9Y3C0 194 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
CHFR-223ENST00000544268 CXorf1O96002 111 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 CRYGCP07315 174 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 PPIAL4GP0DN37 164 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 RPL31P62899 125 aaKnown RBP12.09□□□□□ -0.47
CHFR-223ENST00000544268 PSG3Q16557 428 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 BVES-AS1Q5T3Y7 98 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 OR52E5Q8NH55 327 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 A0A1W2PPR1 153 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 AMY1AP04745 511 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 OR10J4P0C629 311 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
CHFR-223ENST00000544268 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 NUDT3O95989 172 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 SCGB1A1P11684 91 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
CHFR-223ENST00000544268 Q56UQ5 140 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 MIR17HGQ75NE6 70 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 C11orf52Q96A22 123 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 DOPEY1Q5JWR5 2465 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 SPINK4O60575 86 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 PSG9Q00887 426 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 C12orf54Q6X4T0 127 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 ZNF843Q8N446 348 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
CHFR-223ENST00000544268 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
CHFR-223ENST00000544268 ABCA1O95477 2261 aa12.08□□□□□ -0.48
CHFR-223ENST00000544268 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
CHFR-223ENST00000544268 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
CHFR-223ENST00000544268 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
CHFR-223ENST00000544268 CD5LO43866 347 aa12.07□□□□□ -0.48
CHFR-223ENST00000544268 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms