RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 PITX3O75364 302 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 MED6O75586 246 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 SLC25A6P12236 298 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 OR51G1Q8NGK1 321 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 PBDC1Q9BVG4 233 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 SRRQ9GZT4 340 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
TDG-208ENST00000544060 KNCNA6PVL3 124 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 FABP1P07148 127 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 HOXB5P09067 269 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 NUP62P37198 522 aaPredicted RBP13.74□□□□□ -0.21
TDG-208ENST00000544060 RPP30P78346 268 aaKnown RBP13.74□□□□□ -0.21
TDG-208ENST00000544060 GAMTQ14353 236 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 CEMP1Q6PRD7 247 aaPredicted RBP13.74□□□□□ -0.21
TDG-208ENST00000544060 SIGLEC15Q6ZMC9 328 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 RNF125Q96EQ8 232 aa13.74□□□□□ -0.21
TDG-208ENST00000544060 KLK5Q9Y337 293 aaPredicted RBP13.74□□□□□ -0.21
TDG-208ENST00000544060 NAP1L6A6NFF2 107 aa13.73□□□□□ -0.21
TDG-208ENST00000544060 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
TDG-208ENST00000544060 PSMG4Q5JS54 123 aa13.73□□□□□ -0.21
TDG-208ENST00000544060 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
TDG-208ENST00000544060 MORN3Q6PF18 240 aaPredicted RBP13.73□□□□□ -0.21
TDG-208ENST00000544060 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
TDG-208ENST00000544060 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
TDG-208ENST00000544060 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
TDG-208ENST00000544060 DNAH1Q9P2D7 4330 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 ALMS1Q8TCU4 4167 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 BUB3O43684 328 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 SPP1P10451 314 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
TDG-208ENST00000544060 ZNF90Q03938 601 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
TDG-208ENST00000544060 WRBO00258 174 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 SYNGR2O43760 224 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 LYZP61626 148 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 BAK1Q16611 211 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 GGNBP1Q5YKI7 109 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 OR8G2PQ6IF36 304 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 LINC00476Q8WZB0 136 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
TDG-208ENST00000544060 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
TDG-208ENST00000544060 LINC00854A0A1B0GVQ3 168 aa13.7□□□□□ -0.22
TDG-208ENST00000544060 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
TDG-208ENST00000544060 PHLDA1Q8WV24 401 aaPredicted RBP13.7□□□□□ -0.22
TDG-208ENST00000544060 PPP1R14BQ96C90 147 aa13.7□□□□□ -0.22
TDG-208ENST00000544060 C9orf170A2RU37 121 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 CENPXA8MT69 81 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 SNRPGP15A8MWD9 76 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 DEFB4AO15263 64 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 NDUFB6O95139 128 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 LY6G6CO95867 125 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 OR2F1Q13607 317 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 COQ8AQ8NI60 647 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 RAB40CQ96S21 281 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 TRGV9Q99603 122 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
TDG-208ENST00000544060 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
TDG-208ENST00000544060 C4BPBP20851 252 aa13.68□□□□□ -0.22
TDG-208ENST00000544060 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
TDG-208ENST00000544060 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
TDG-208ENST00000544060 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
TDG-208ENST00000544060 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
TDG-208ENST00000544060 PLECQ15149 4684 aaKnown RBP13.68□□□□□ -0.22
TDG-208ENST00000544060 H3BP45 60 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 ADAP1O75689 374 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 IFNA21P01568 189 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 FLVCR2Q9UPI3 526 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 STRAPQ9Y3F4 350 aaKnown RBP13.67□□□□□ -0.22
TDG-208ENST00000544060 AGRNO00468 2067 aa13.67□□□□□ -0.22
TDG-208ENST00000544060 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
TDG-208ENST00000544060 NUTF2P61970 127 aaKnown RBP13.66□□□□□ -0.22
TDG-208ENST00000544060 AKR1C1Q04828 323 aa13.66□□□□□ -0.22
TDG-208ENST00000544060 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
TDG-208ENST00000544060 C1orf194Q5T5A4 169 aa13.66□□□□□ -0.22
TDG-208ENST00000544060 C7orf50Q9BRJ6 194 aaKnown RBP13.66□□□□□ -0.22
TDG-208ENST00000544060 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
TDG-208ENST00000544060 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 CFDP00746 253 aaPredicted RBP13.65□□□□□ -0.22
TDG-208ENST00000544060 OR4E1P0C645 316 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 ID1P41134 155 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 Q8NAQ8 132 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 LINC00052Q96N35 136 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 SDHCQ99643 169 aaPredicted RBP13.65□□□□□ -0.22
TDG-208ENST00000544060 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
TDG-208ENST00000544060 HYDINQ4G0P3 5121 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 IGHV4-28A0A0C4DH34 117 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 IL7P13232 177 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 MIFP14174 115 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 ANXA7P20073 488 aaKnown RBP13.64□□□□□ -0.23
TDG-208ENST00000544060 NKX2-1P43699 371 aaPredicted RBP13.64□□□□□ -0.23
TDG-208ENST00000544060 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
TDG-208ENST00000544060 OR8I2Q8N0Y5 310 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 TBC1D24Q9ULP9 559 aa13.64□□□□□ -0.23
TDG-208ENST00000544060 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
TDG-208ENST00000544060 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
TDG-208ENST00000544060 H3BMM0 161 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms