RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 TIGITQ495A1 244 aa12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 RNASE7Q9H1E1 156 aaKnown RBP12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 F11RQ9Y624 299 aaKnown RBP12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 HRNRQ86YZ3 2850 aaPredicted RBP12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 RNF5Q99942 180 aa12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
SCNN1A-221ENST00000543768 ORM2P19652 201 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 ADMP35318 185 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 ARF6P62330 175 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 LPAR2Q9HBW0 351 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 BRS3P32247 399 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 SRSF12Q8WXF0 261 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 MIEN1Q9BRT3 115 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.36
SCNN1A-221ENST00000543768 CORTO00230 105 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 TIMM23O14925 209 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 FRMD6-AS1P0C7T7 363 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 CBLN1P23435 193 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 TPTE2P1Q5T6R2 138 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 TMEM256Q8N2U0 113 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 OR11H6Q8NGC7 330 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 OR1B1Q8NGR6 318 aa12.82□□□□□ -0.36
SCNN1A-221ENST00000543768 ISLRO14498 428 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 OR8I2Q8N0Y5 310 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 PERPQ96FX8 193 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 TIMD4Q96H15 378 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 A0A1B0GUS0 222 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 MYCNOSP40205 109 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 GSX1Q9H4S2 264 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-221ENST00000543768 HTR1DP28221 377 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 FXYD3Q14802 87 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 NEU4Q8WWR8 484 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 COL6A6A6NMZ7 2263 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 ABCA1O95477 2261 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 NUPR1O60356 82 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 MGST1P10620 155 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 PLP1P60201 277 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 CFHR4Q92496 578 aa12.8□□□□□ -0.36
SCNN1A-221ENST00000543768 PEX7O00628 323 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 KLRD1Q13241 179 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 PLGLAQ15195 96 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 IBA57Q5T440 356 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 TOMM20LQ6UXN7 152 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 STXBP6Q8NFX7 210 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 MRPL18Q9H0U6 180 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 I3L2K1 104 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 M0R1W7 72 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 HYPMO75409 117 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 IER3P46695 156 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 CX3CL1P78423 397 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 IGFBPL1Q8WX77 278 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
SCNN1A-221ENST00000543768 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 A0A1W2PPR1 153 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 MMDQ15546 238 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 CMTM2Q8TAZ6 248 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 WNT10AQ9GZT5 417 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 ODF3BA8MYP8 253 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 IGLC1P0CG04 106 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 PRTN3P24158 256 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 DTX2Q86UW9 622 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 TP53TG3Q9ULZ0 132 aa12.78□□□□□ -0.36
SCNN1A-221ENST00000543768 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 GRIFINA4D1Z8 144 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 GNG5P63218 68 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 FBLN7Q53RD9 439 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 BLNKQ8WV28 456 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 GNB1LQ9BYB4 327 aa12.77□□□□□ -0.36
SCNN1A-221ENST00000543768 SNURFLB1AK76 121 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 NBR2O15453 112 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 PSG1P11464 419 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 GP9P14770 177 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 CD24P25063 80 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 PAFAH1B2P68402 229 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 ASPHD1Q5U4P2 390 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 BAGE2Q86Y30 109 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 EPDR1Q9UM22 224 aa12.77□□□□□ -0.37
SCNN1A-221ENST00000543768 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 SPINK4O60575 86 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 NDUFA3O95167 84 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms