RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	SEC14L6	B5MCN3	397 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	LGALS9	O00182	355 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	AGPAT2	O15120	278 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	SAP30	O75446	220 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	CFD	P00746	253 aa	Predicted RBP	7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	C1QB	P02746	253 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	GATA2	P23769	480 aa	Predicted RBP	7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	EIF2B2	P49770	351 aa	Known RBP	7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	SELENOT	P62341	195 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	PRR31	Q5SQ13	230 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	REC114	Q7Z4M0	266 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	TMEM190	Q8WZ59	177 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	PPP1R14B	Q96C90	147 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	NARS2	Q96I59	477 aa	Known RBP	7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	HYLS1	Q96M11	299 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	METTL26	Q96S19	204 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	MGST2	Q99735	147 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	NEURL2	Q9BR09	285 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	MCRIP2	Q9BUT9	160 aa	Known RBP	7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	DNHD1	Q96M86	4753 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	TENM1	Q9UKZ4	2725 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGHV3-49	A0A0A0MS15	119 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545		A0A0D9SG52	128 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	KANTR	A0A1W2PQU2	76 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	C2orf70	A6NJV1	201 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	C17orf112	F2Z3M2	114 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	MPDU1	O75352	247 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	LINC00869	P0C866	280 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	ORM2	P19652	201 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	NPPC	P23582	126 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	ZNF266	Q14584	549 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545		Q6ZRG5	221 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	WFDC9	Q8NEX5	89 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	OR1B1	Q8NGR6	318 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	DYNLRB2	Q8TF09	96 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	RNF125	Q96EQ8	232 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	WDR61	Q9GZS3	305 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	ARL6	Q9H0F7	186 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	DAZ1	Q9NQZ3	744 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	DOK5	Q9P104	306 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	SLC45A2	Q9UMX9	530 aa		7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	LSM4	Q9Y4Z0	139 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGHV3OR16-13	A0A075B7E8	117 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGHV3-74	A0A0B4J1X5	117 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGHV3-66	A0A0C4DH42	116 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545		K7EMT4	169 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	TAAR5	O14804	337 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	HYPM	O75409	117 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	OR5G3	P0C626	314 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	FOLR2	P14207	255 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGLL1	P15814	213 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	CXCL2	P19875	107 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	CBLN1	P23435	193 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	BMI1	P35226	326 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	ELL	P55199	621 aa	Predicted RBP	7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	C9orf66	Q5T8R8	295 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	MIC13	Q5XKP0	118 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	TMUB2	Q71RG4	321 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	KCNRG	Q8N5I3	272 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	HSD17B11	Q8NBQ5	300 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	MARC2	Q969Z3	335 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	ARPC5L	Q9BPX5	153 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	GGTLC1	Q9BX51	225 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	NPCDR1	Q9BY65	106 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	ZFAND3	Q9H8U3	227 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	KCNIP2	Q9NS61	270 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	MRPL27	Q9P0M9	148 aa	Known RBP	7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	PFDN2	Q9UHV9	154 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	RABAC1	Q9UI14	185 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	SELENOK	Q9Y6D0	94 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	ANK2	Q01484	3957 aa		7.74	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGHV7-4-1	A0A0J9YVY3	117 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545		A0A1W2PS18	150 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	TMEM213	A2RRL7	107 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	COX7A2P2	O60397	106 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	CSN3	P07498	182 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	HNRNPC	P07910	306 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	EDN2	P20800	178 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	S100A7	P31151	101 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	RPL29	P47914	159 aa	Known RBP	7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	B2M	P61769	119 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	ZNF345	Q14585	488 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	OPCML	Q14982	345 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	USF2	Q15853	346 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	RPL7L1	Q6DKI1	246 aa	Known RBP	7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	IL34	Q6ZMJ4	242 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	S100A7A	Q86SG5	101 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	STPG3	Q8N7X2	389 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	RHPN1-AS1	Q9BWJ2	59 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	GPR61	Q9BZJ8	451 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	SLC39A9	Q9NUM3	307 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	SMPX	Q9UHP9	88 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545	PXMP4	Q9Y6I8	212 aa		7.73	□□□□□ -1.17
CPSF7-221	ENST00000543545		A8MWP6	167 aa		7.72	□□□□□ -1.17
CPSF7-221	ENST00000543545	BCL2L11	O43521	198 aa		7.72	□□□□□ -1.17
CPSF7-221	ENST00000543545	JTB	O76095	146 aa		7.72	□□□□□ -1.17
CPSF7-221	ENST00000543545	C4BPB	P20851	252 aa		7.72	□□□□□ -1.17
CPSF7-221	ENST00000543545	NKX2-5	P52952	324 aa	Predicted RBP	7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms