RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 ZFP92A6NM28 416 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 IAPPP10997 89 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 GAMTQ14353 236 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 RNF125Q96EQ8 232 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 RARRES2Q99969 163 aa12.82□□□□□ -0.36
LTBR-210ENST00000542830 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
LTBR-210ENST00000542830 C9orf170A2RU37 121 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 BUB3O43684 328 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 SYNGR2O43760 224 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
LTBR-210ENST00000542830 ZNF688P0C7X2 276 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 DHRS2Q13268 280 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 TMEM41BQ5BJD5 291 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 GGNBP1Q5YKI7 109 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 COQ8AQ8NI60 647 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 LYSTQ99698 3801 aa12.81□□□□□ -0.36
LTBR-210ENST00000542830 SEPSECSQ9HD40 501 aaKnown RBP12.81□□□□□ -0.36
LTBR-210ENST00000542830 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
LTBR-210ENST00000542830 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
LTBR-210ENST00000542830 NUPR2A6NF83 97 aa12.8□□□□□ -0.36
LTBR-210ENST00000542830 CNPY1Q3B7I2 92 aa12.8□□□□□ -0.36
LTBR-210ENST00000542830 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
LTBR-210ENST00000542830 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
LTBR-210ENST00000542830 RYR2Q92736 4967 aa12.8□□□□□ -0.36
LTBR-210ENST00000542830 IGKV1D-37A0A075B6S9 117 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 IFNA21P01568 189 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 SPP1P10451 314 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
LTBR-210ENST00000542830 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
LTBR-210ENST00000542830 TRPT1Q86TN4 253 aaKnown RBP12.79□□□□□ -0.36
LTBR-210ENST00000542830 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 TRGV9Q99603 122 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 PBDC1Q9BVG4 233 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 MAGT1Q9H0U3 335 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
LTBR-210ENST00000542830 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
LTBR-210ENST00000542830 WRBO00258 174 aa12.78□□□□□ -0.36
LTBR-210ENST00000542830 OR4E1P0C645 316 aa12.78□□□□□ -0.36
LTBR-210ENST00000542830 EWSR1Q01844 656 aaKnown RBP eCLIP12.78□□□□□ -0.36
LTBR-210ENST00000542830 ZNF90Q03938 601 aa12.78□□□□□ -0.36
LTBR-210ENST00000542830 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
LTBR-210ENST00000542830 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.37
LTBR-210ENST00000542830 IL7P13232 177 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 LYZP61626 148 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 SPANXN5Q5MJ07 72 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 THAP8Q8NA92 274 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.37
LTBR-210ENST00000542830 FBXL17Q9UF56 701 aa12.77□□□□□ -0.37
LTBR-210ENST00000542830 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
LTBR-210ENST00000542830 KNCNA6PVL3 124 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 ADAP1O75689 374 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 BTCP35070 178 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 NKX2-1P43699 371 aaPredicted RBP12.76□□□□□ -0.37
LTBR-210ENST00000542830 ID3Q02535 119 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 C4orf46Q504U0 113 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
LTBR-210ENST00000542830 RAB40CQ96S21 281 aa12.76□□□□□ -0.37
LTBR-210ENST00000542830 PRSS46E5RG02 174 aa12.75□□□□□ -0.37
LTBR-210ENST00000542830 AGRNO00468 2067 aa12.75□□□□□ -0.37
LTBR-210ENST00000542830 ANXA7P20073 488 aaKnown RBP12.75□□□□□ -0.37
LTBR-210ENST00000542830 PPP1R14BQ96C90 147 aa12.75□□□□□ -0.37
LTBR-210ENST00000542830 KLK5Q9Y337 293 aaPredicted RBP12.75□□□□□ -0.37
LTBR-210ENST00000542830 IGKV1OR2-108A0A075B7D4 117 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 S100A7P31151 101 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
LTBR-210ENST00000542830 OR2F1Q13607 317 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 OR4D5Q8NGN0 318 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 MFFQ9GZY8 342 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 SLC45A2Q9UMX9 530 aa12.74□□□□□ -0.37
LTBR-210ENST00000542830 H3BP45 60 aa12.73□□□□□ -0.37
LTBR-210ENST00000542830 GIG44P09565 113 aaPredicted RBP12.73□□□□□ -0.37
LTBR-210ENST00000542830 NUTF2P61970 127 aaKnown RBP12.73□□□□□ -0.37
LTBR-210ENST00000542830 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
LTBR-210ENST00000542830 SAMD13Q5VXD3 122 aa12.73□□□□□ -0.37
LTBR-210ENST00000542830 PSENENQ9NZ42 101 aa12.73□□□□□ -0.37
LTBR-210ENST00000542830 ALMS1Q8TCU4 4167 aa12.73□□□□□ -0.37
LTBR-210ENST00000542830 LYRM1O43325 122 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 C4BPBP20851 252 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 ID1P41134 155 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 ACOT7LQ6ZUV0 252 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 OR8I2Q8N0Y5 310 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 BPIFCQ8NFQ6 507 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
LTBR-210ENST00000542830 MITD1Q8WV92 249 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 C20orf85Q9H1P6 137 aa12.72□□□□□ -0.37
LTBR-210ENST00000542830 PLECQ15149 4684 aaKnown RBP12.71□□□□□ -0.37
LTBR-210ENST00000542830 PLA2G10O15496 165 aa12.71□□□□□ -0.37
LTBR-210ENST00000542830 SSSCA1O60232 199 aa12.71□□□□□ -0.37
LTBR-210ENST00000542830 MIFP14174 115 aa12.71□□□□□ -0.37
LTBR-210ENST00000542830 PSMB3P49720 205 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms