RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 FXYD5Q96DB9 178 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 RITA1Q96K30 269 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 GNB1LQ9BYB4 327 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 ONECUT1Q9UBC0 465 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 TBL2Q9Y4P3 447 aaKnown RBP7.87□□□□□ -1.15
SS18-205ENST00000542420 KLF12Q9Y4X4 402 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 TRAV30A0A087WSZ9 112 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 GATA2P23769 480 aaPredicted RBP7.87□□□□□ -1.15
SS18-205ENST00000542420 ZNF90Q03938 601 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 LEMD1Q68G75 181 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 ZNF705AQ6ZN79 300 aaPredicted RBP7.87□□□□□ -1.15
SS18-205ENST00000542420 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 MIEN1Q9BRT3 115 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 NPIPB5A8MRT5 1133 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 I3L2K1 104 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 PEX7O00628 323 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 ESDP10768 282 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 MFAP2P55001 183 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
SS18-205ENST00000542420 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 KLK9Q2XQG4 91 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 C16orf54Q6UWD8 224 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 KLK9Q9UKQ9 250 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 LOC400499M0QZD8 3231 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 DMXL1Q9Y485 3027 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 PKDREJQ9NTG1 2253 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 PTPRZ1P23471 2315 aaPredicted RBP7.86□□□□□ -1.15
SS18-205ENST00000542420 IGLV2-8P01709 118 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 COX7A1P24310 79 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 CX3CL1P78423 397 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 HCP5Q6MZN7 132 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 CELSR3Q9NYQ7 3312 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 FRYQ5TBA9 3013 aa7.86□□□□□ -1.15
SS18-205ENST00000542420 ANKHD1Q8IWZ3 2542 aaKnown RBP7.85□□□□□ -1.15
SS18-205ENST00000542420 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 TMEM8BA6NDV4 472 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 IGLC1P0CG04 106 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 SSBP2P81877 361 aaPredicted RBP7.85□□□□□ -1.15
SS18-205ENST00000542420 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 OR5T1Q8NG75 326 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 WIPF2Q8TF74 440 aaPredicted RBP7.85□□□□□ -1.15
SS18-205ENST00000542420 FBXL15Q9H469 300 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 HIGD1AQ9Y241 93 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 BSNQ9UPA5 3926 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 NAV3Q8IVL0 2385 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 IGHV3-72A0A0B4J1Y9 119 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 PGPEP1LA6NFU8 196 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 TIMM23O14925 209 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 SCGB2A1O75556 95 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 CNTFRP26992 372 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 S100A7P31151 101 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 CT83Q5H943 113 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 COL5A1-AS1Q5SY13 56 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 TEX43Q6ZNM6 134 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 Q8N6K4 173 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
SS18-205ENST00000542420 MRPL36Q9P0J6 103 aaKnown RBP7.85□□□□□ -1.15
SS18-205ENST00000542420 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
SS18-205ENST00000542420 CIDEAO60543 219 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 GP9P14770 177 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 FCGR2BP31994 310 aaPredicted RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 EFNA4P52798 201 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 Q0VG73 95 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 PLGLAQ15195 96 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 CDSNQ15517 529 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 C5orf64Q2M2E5 130 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 IBA57Q5T440 356 aaKnown RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 ZNF562Q6V9R5 426 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 MRPL27Q9P0M9 148 aaKnown RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 ZNF492Q9P255 531 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 EPDR1Q9UM22 224 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 MAP1BP46821 2468 aaKnown RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 SPENQ96T58 3664 aaKnown RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 TLN1Q9Y490 2541 aaKnown RBP7.84□□□□□ -1.15
SS18-205ENST00000542420 TOMM40O96008 361 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 HLA-DQA1P01909 254 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 PAFAH1B2P68402 229 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 MMDQ15546 238 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 MBD6Q96DN6 1003 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 GRAMD2BQ96HH9 432 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 WNT10AQ9GZT5 417 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
SS18-205ENST00000542420 ROS1P08922 2347 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 C20orf202A1L168 122 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 REG1AP05451 166 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 NBEAP1P0C6P0 100 aa7.83□□□□□ -1.16
SS18-205ENST00000542420 HIST1H1EP10412 219 aaKnown RBP7.83□□□□□ -1.16
SS18-205ENST00000542420 MORN5Q5VZ52 161 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms