RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SFTPCP11686 197 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 TSPOP30536 169 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 GAFA1Q96PS6 74 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 CBY1Q9Y3M2 126 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 PGPA6NDG6 321 aa12.4□□□□□ -0.43
CNOT9-208ENST00000542068 CCL25O15444 150 aa12.4□□□□□ -0.43
CNOT9-208ENST00000542068 TBR1Q16650 682 aa12.4□□□□□ -0.43
CNOT9-208ENST00000542068 FNDC4Q9H6D8 234 aaPredicted RBP12.4□□□□□ -0.43
CNOT9-208ENST00000542068 A0A1W2PRD5 423 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 A0A1W2PRF3 423 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 A0A1W2PRM7 423 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 APOA2P02652 100 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 TNFRSF1AP19438 455 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 LYPD2Q6UXB3 125 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 KLHDC1Q8N7A1 406 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 FAM167A-AS1Q96KT0 104 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF835Q9Y2P0 537 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 IGLL1P15814 213 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 RUSC1-AS1Q66K80 236 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 SPATA12Q7Z6I5 190 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 Q9UFV3 132 aa12.39□□□□□ -0.43
CNOT9-208ENST00000542068 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 GAGE1Q13065 139 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 Q6ZS92 163 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■■■■ 34.2
CNOT9-208ENST00000542068 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 FAM87AP0C7U9 286 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 TPSG1Q9NRR2 321 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 VWC2LB2RUY7 222 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 SLC25A17O43808 307 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 CGB3P0DN86 165 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 CGB7P0DN87 165 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 COX7A1P24310 79 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 VAMP3Q15836 100 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 RNASE8Q8TDE3 154 aaKnown RBP12.38□□□□□ -0.43
CNOT9-208ENST00000542068 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
CNOT9-208ENST00000542068 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 SNAI2O43623 268 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 LINC00614P0C842 121 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 IGFBPL1Q8WX77 278 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 NDUFB3O43676 98 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 RAB9BQ9NP90 201 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
CNOT9-208ENST00000542068 PPIAL4EA0A075B759 164 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 PPIAL4DF5H284 164 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 PPIAL4FP0DN26 164 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 Q71RC1 249 aaPredicted RBP12.36□□□□□ -0.43
CNOT9-208ENST00000542068 OR1L8Q8NGR8 309 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
CNOT9-208ENST00000542068 DLL1O00548 723 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 CA7P43166 264 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 C2orf83Q53S99 150 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 LINC00322Q6ZN03 302 aaPredicted RBP12.36□□□□□ -0.43
CNOT9-208ENST00000542068 PDPNQ86YL7 162 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 CBY3A6NI87 242 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 LY6HO94772 140 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 ADIPOQQ15848 244 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 RITA1Q96K30 269 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 RPUSD1Q9UJJ7 312 aaKnown RBP12.36□□□□□ -0.43
CNOT9-208ENST00000542068 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
CNOT9-208ENST00000542068 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 C17orf100A8MU93 164 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 PLGLAQ15195 96 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 ALKBH7Q9BT30 221 aaPredicted RBP12.35□□□□□ -0.43
CNOT9-208ENST00000542068 WASHC3Q9Y3C0 194 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF788Q6ZQV5 615 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 GAL3ST2Q9H3Q3 398 aa12.35□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
CNOT9-208ENST00000542068 TRAV9-2A0A087WT02 112 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 LHBP01229 141 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 LRRC10Q5BKY1 277 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 TMEM200BQ69YZ2 307 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
CNOT9-208ENST00000542068 ZC2HC1AQ96GY0 325 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 MPV17L2Q567V2 206 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
CNOT9-208ENST00000542068 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
CNOT9-208ENST00000542068 IGLV3-9A0A075B6K5 115 aa12.33□□□□□ -0.44
CNOT9-208ENST00000542068 BPIFB3P59826 476 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms