RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ZNF727A8MUV8 499 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 NBR2O15453 112 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 VDAC2P45880 294 aaPredicted RBP6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 FHITP49789 147 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 ERVFC1-1P60608 527 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 HSPE1P61604 102 aaKnown RBP6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 POU2AF1Q16633 256 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 DEFB112Q30KQ8 113 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 VMA21Q3ZAQ7 101 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 PDZD11Q5EBL8 140 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 TMEM167AQ8TBQ9 72 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 PIFOQ8TCI5 191 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 PYGO2Q9BRQ0 406 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 RSG1Q9BU20 258 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 PLEKHA3Q9HB20 300 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 GOLT1BQ9Y3E0 138 aa6.12□□□□□ -1.43
AC005840.3-201ENST00000541888 A0A1B0GV50 99 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 CYSRT1A8MQ03 144 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PMS2P5A8MQ11 134 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 CNIH1O95406 144 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 IGHV4-59P01825 116 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 CRYGBP07316 175 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 CD1BP29016 333 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 KRTAP1-1Q07627 177 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 BAXQ07812 192 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SLC38A11Q08AI6 406 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PRSS8Q16651 343 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 ACOT6Q3I5F7 207 aaPredicted RBP6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 MINOS1Q5TGZ0 78 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 CYB561D1Q8N8Q1 229 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 OR2G3Q8NGZ4 309 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SSMEM1Q8WWF3 244 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PINX1Q96BK5 328 aaKnown RBP6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 P2RX4Q99571 388 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 RARRES2Q99969 163 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SNHG12Q9BXW3 62 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 MINOS1-NBL1R4GNA1 71 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 FAM90A26D6RGX4 464 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 ACTL6BO94805 426 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 ATP6V0CP27449 155 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 MFAP2P55001 183 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PRCDQ00LT1 54 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 C1orf194Q5T5A4 169 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 HIST2H2BDQ6DRA6 164 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 TMEM14EPQ6UXP3 125 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 Q8N9W7 124 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SLC24A4Q8NFF2 622 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 OR2T10Q8NGZ9 312 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 SRSF12Q8WXF0 261 aaKnown RBP6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 BTF3L4Q96K17 158 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 NDUFA4L2Q9NRX3 87 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 PRNDQ9UKY0 176 aa6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 TBL2Q9Y4P3 447 aaKnown RBP6.11□□□□□ -1.43
AC005840.3-201ENST00000541888 NIPBLQ6KC79 2804 aaeCLIP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 IGLC7A0M8Q6 106 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 TEX22C9J3V5 150 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 ZNF25P17030 456 aaPredicted RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 NPY1RP25929 384 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 RPL27AP46776 148 aaKnown RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 LGALS7P47929 136 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 PCP4P48539 62 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 COMPP49747 757 aaPredicted RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 FAM3BP58499 235 aaPredicted RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 C5orf64Q2M2E5 130 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 TMEM95Q3KNT9 176 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 AARDQ4LEZ3 155 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 CYB5R2Q6BCY4 276 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 Q8N6K4 173 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 OR1L8Q8NGR8 309 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 OR4X1Q8NH49 305 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 ZNF48Q96MX3 618 aaPredicted RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 SLC25A33Q9BSK2 321 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 VSIRQ9H7M9 311 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 ENY2Q9NPA8 101 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 MRPL36Q9P0J6 103 aaKnown RBP6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 URGCP-MRPS24S4R325 110 aa6.1□□□□□ -1.43
AC005840.3-201ENST00000541888 FAM90A9PA6NNJ1 464 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 G3V318 75 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 IFNA1P01562 189 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 IGHV3-23P01764 117 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 AMY1AP04745 511 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 FAM106CPP0CH98 169 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 RNASE2P10153 161 aaKnown RBP6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 G0S2P27469 103 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 ELLP55199 621 aaPredicted RBP6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 RANP62826 216 aaKnown RBP6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 BLCAPP62952 87 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 CX3CL1P78423 397 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 COTL1Q14019 142 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 FXYD3Q14802 87 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 ECSCRQ19T08 205 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
AC005840.3-201ENST00000541888 SLC25A24Q6NUK1 477 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms