RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
VARS2-211ENST00000541562 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 MMDQ15546 238 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 FBXL7Q9UJT9 491 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 Q56UQ5 140 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 PRNTQ86SH4 94 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
VARS2-211ENST00000541562 SNHG12Q9BXW3 62 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 ZNF331Q9NQX6 463 aaPredicted RBP12.08□□□□□ -0.48
VARS2-211ENST00000541562 CLEC5AQ9NY25 188 aa12.08□□□□□ -0.48
VARS2-211ENST00000541562 CEACAM8P31997 349 aaPredicted RBP12.07□□□□□ -0.48
VARS2-211ENST00000541562 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
VARS2-211ENST00000541562 RPEQ96AT9 228 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 NEU1Q99519 415 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 DLL1O00548 723 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 TAS2R45P59539 299 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 NDUFA4L2Q9NRX3 87 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 CORO2AQ92828 525 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 ADTRPQ96IZ2 230 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
VARS2-211ENST00000541562 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
VARS2-211ENST00000541562 IGHV1-8P0DP01 117 aa12.06□□□□□ -0.48
VARS2-211ENST00000541562 PPOXP50336 477 aa12.06□□□□□ -0.48
VARS2-211ENST00000541562 WASHC3Q9Y3C0 194 aa12.06□□□□□ -0.48
VARS2-211ENST00000541562 HIGD1CA8MV81 97 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 M0R3E3 92 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
VARS2-211ENST00000541562 TPPP2P59282 170 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 ZNF841Q6ZN19 808 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 RAB1CQ92928 201 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 LRRK2Q5S007 2527 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 CFHR2P36980 270 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 VMA21Q3ZAQ7 101 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 PDPNQ86YL7 162 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 MUC15Q8N387 334 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 NUDT10Q8NFP7 164 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 NUDT11Q96G61 164 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 DIRC3C9JPN6 131 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 PPIAL4GP0DN37 164 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 FOXL1Q12952 345 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 MYO9AB2RTY4 2548 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 ITPR1Q14643 2758 aa12.05□□□□□ -0.48
VARS2-211ENST00000541562 TCAPO15273 167 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 SNAI2O43623 268 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 CEACAM4O75871 244 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 ZNF25P17030 456 aaPredicted RBP12.04□□□□□ -0.48
VARS2-211ENST00000541562 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 PKD1L2Q7Z442 2459 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 CCDC168Q8NDH2 2452 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 LDLRAD2Q5SZI1 272 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 VAMP8Q9BV40 100 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 APCSP02743 223 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 LCN2P80188 198 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
VARS2-211ENST00000541562 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 PEX7O00628 323 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 TIMM23O14925 209 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 CD3EP07766 207 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 GATA4P43694 442 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 IGKV1D-37A0A075B6S9 117 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 BMPR1BO00238 502 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 IGLV2-8P01709 118 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 NBEAP1P0C6P0 100 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 LY6DQ14210 128 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 PSG1P11464 419 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
VARS2-211ENST00000541562 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
VARS2-211ENST00000541562 ZNF207O43670 478 aaKnown RBP12.02□□□□□ -0.48
VARS2-211ENST00000541562 TBR1Q16650 682 aa12.02□□□□□ -0.48
VARS2-211ENST00000541562 C2orf83Q53S99 150 aa12.02□□□□□ -0.48
VARS2-211ENST00000541562 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.48
VARS2-211ENST00000541562 NUP35Q8NFH5 326 aa12.02□□□□□ -0.48
VARS2-211ENST00000541562 NOL4LQ96MY1 436 aaPredicted RBP12.02□□□□□ -0.48
VARS2-211ENST00000541562 ZNF257Q9Y2Q1 563 aa12.02□□□□□ -0.48
VARS2-211ENST00000541562 VWC2LB2RUY7 222 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 J3KRW8 73 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 HSBP1O75506 76 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 GCGP01275 180 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 TMPRSS3P57727 454 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 TMEM177Q53S58 311 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 OR1L4Q8NGR5 311 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 TMEM133Q9H2Q1 129 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 BET1LQ9NYM9 111 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 IGLV2-23P01705 113 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
VARS2-211ENST00000541562 CR1LQ2VPA4 569 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 TXN2Q99757 166 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms