RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CA7P43166 264 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 MMDQ15546 238 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 C10orf113Q5VZT2 155 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
RNF4-222ENST00000541204 RITA1Q96K30 269 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 GOLT1BQ9Y3E0 138 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 APELAP0DMC3 54 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 PRRX1P54821 245 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 MFAP2P55001 183 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 ATOH7Q8N100 152 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
RNF4-222ENST00000541204 HRNRQ86YZ3 2850 aaPredicted RBP10.06□□□□□ -0.8
RNF4-222ENST00000541204 CGB1A6NKQ9 187 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 B9A039 149 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 PEX7O00628 323 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 TNFRSF13BO14836 293 aaPredicted RBP10.05□□□□□ -0.8
RNF4-222ENST00000541204 GNG5P63218 68 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 PRR31Q5SQ13 230 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 NUP35Q8NFH5 326 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 MRPL36Q9P0J6 103 aaKnown RBP10.05□□□□□ -0.8
RNF4-222ENST00000541204 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 ITPR1Q14643 2758 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 PLXNB1O43157 2135 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 OR5AN1Q8NGI8 311 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 SSBP4Q9BWG4 385 aaPredicted RBP10.05□□□□□ -0.8
RNF4-222ENST00000541204 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
RNF4-222ENST00000541204 IGKV1D-37A0A075B6S9 117 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 REG1AP05451 166 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 GPR6P46095 362 aaPredicted RBP10.04□□□□□ -0.8
RNF4-222ENST00000541204 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 ZNF430Q9H8G1 570 aaPredicted RBP10.04□□□□□ -0.8
RNF4-222ENST00000541204 COL12A1Q99715 3063 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 TCRBV4S1A1TA0A5B7 111 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 CORTO00230 105 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 SLC25A17O43808 307 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 HYPMO75409 117 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 IGLC3P0DOY3 106 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 COX7A1P24310 79 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 KLRB1Q12918 225 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 LY6DQ14210 128 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 TNXAQ16473 311 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 LCN12Q6JVE5 192 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 OR1L4Q8NGR5 311 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 FXYD5Q96DB9 178 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 TXN2Q99757 166 aa10.04□□□□□ -0.8
RNF4-222ENST00000541204 A0A1W2PN81 502 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 CAMPP49913 170 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 GAGE1Q13065 139 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 RUSC1-AS1Q66K80 236 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 Q6ZN92 141 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 LINC00305Q7Z4B0 112 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 FSTL3O95633 263 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 BPIFB3P59826 476 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 COL5A1-AS1Q5SY13 56 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
RNF4-222ENST00000541204 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 ORM2P19652 201 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 UCNP55089 124 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 DLX6P56179 175 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 IGFBPL1Q8WX77 278 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 MRPL27Q9P0M9 148 aaKnown RBP10.03□□□□□ -0.8
RNF4-222ENST00000541204 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
RNF4-222ENST00000541204 VWC2LB2RUY7 222 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 HSBP1O75506 76 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 MOSP00540 346 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 INS-IGF2F8WCM5 200 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 CNTFRP26992 372 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
RNF4-222ENST00000541204 UBE2G1P62253 170 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 TMEM186Q96B77 213 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms