RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PMS2P5A8MQ11 134 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 H3BP45 60 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 TSC22D2O75157 780 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 FABP1P07148 127 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 PAX9P55771 341 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 PAFAH1B2P68402 229 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 OR8G2PQ6IF36 304 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 TMEM14EPQ6UXP3 125 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 C12orf45Q8N5I9 185 aaPredicted RBP9.73□□□□□ -0.85
LTBR-208ENST00000541005 ENKURQ8TC29 256 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 GLMPQ8WWB7 406 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 GRAMD2BQ96HH9 432 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 PSENENQ9NZ42 101 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 UBQLN2Q9UHD9 624 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 PAIP2BQ9ULR5 123 aaKnown RBP9.73□□□□□ -0.85
LTBR-208ENST00000541005 LOC102724200A0A096LPH7 203 aaPredicted RBP9.72□□□□□ -0.85
LTBR-208ENST00000541005 MBPP02686 304 aaPredicted RBP9.72□□□□□ -0.85
LTBR-208ENST00000541005 NUP62P37198 522 aaPredicted RBP9.72□□□□□ -0.85
LTBR-208ENST00000541005 ZNF90Q03938 601 aa9.72□□□□□ -0.85
LTBR-208ENST00000541005 C16orf54Q6UWD8 224 aa9.72□□□□□ -0.85
LTBR-208ENST00000541005 ACOT7LQ6ZUV0 252 aa9.72□□□□□ -0.85
LTBR-208ENST00000541005 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
LTBR-208ENST00000541005 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
LTBR-208ENST00000541005 IGKV3-7A0A075B6H7 116 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 KIR2DL5BA0A0G2JN68 375 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 KIR2DL5BA0A0G2JPC4 375 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 HELTA6NFD8 242 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 FNDC10F2Z333 226 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 K7EQG2 157 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 CCSO14618 274 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 BUB3O43684 328 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 SCGB1D2O95969 90 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 CFDP00746 253 aaPredicted RBP9.71□□□□□ -0.86
LTBR-208ENST00000541005 EIF2B2P49770 351 aaKnown RBP9.71□□□□□ -0.86
LTBR-208ENST00000541005 NRARPQ7Z6K4 114 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 KIR2DL5AQ8N109 375 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 GBGT1Q8N5D6 347 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 GSKIPQ9P0R6 139 aa9.71□□□□□ -0.86
LTBR-208ENST00000541005 TFPI2P48307 235 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
LTBR-208ENST00000541005 APOC4P55056 127 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 DEFA1P59665 94 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 DEFA3P59666 94 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 DLK1P80370 383 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 IL15RAQ13261 267 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 DCANP1Q8TF63 244 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 C2orf50Q96LR7 162 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 C11orf1Q9H5F2 150 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 PFDN2Q9UHV9 154 aa9.7□□□□□ -0.86
LTBR-208ENST00000541005 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 C5orf51A6NDU8 294 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 SNRPGP15A8MWD9 76 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 K7EPK0 472 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
LTBR-208ENST00000541005 UBE2CO00762 179 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 PRAF2O60831 178 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 RPL11P62913 178 aaKnown RBP9.69□□□□□ -0.86
LTBR-208ENST00000541005 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 MARVELD1Q9BSK0 173 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 GPN1Q9HCN4 374 aaPredicted RBP9.69□□□□□ -0.86
LTBR-208ENST00000541005 RETNQ9HD89 108 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 SLC45A2Q9UMX9 530 aa9.69□□□□□ -0.86
LTBR-208ENST00000541005 FAM25EA8MYX2 175 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 CCNKO75909 580 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 METTL15P1P0C7V9 234 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 LYZP61626 148 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 C1orf194Q5T5A4 169 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 GSG1LQ6UXU4 331 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 SIGLEC15Q6ZMC9 328 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 Q6ZWC4 215 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 FAM24BQ8N5W8 94 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 STPG3Q8N7X2 389 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 OR10P1Q8NGE3 313 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 GGACTQ9BVM4 153 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 SEPSECSQ9HD40 501 aaKnown RBP9.68□□□□□ -0.86
LTBR-208ENST00000541005 TP53TG1Q9Y2A0 90 aa9.68□□□□□ -0.86
LTBR-208ENST00000541005 INMT-MINDY4F8WBC2 141 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 OR2F1Q13607 317 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 ZNF124Q15973 351 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 BPIFCQ8NFQ6 507 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 NRN1Q9NPD7 142 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
LTBR-208ENST00000541005 L7N2F9 121 aa9.66□□□□□ -0.86
LTBR-208ENST00000541005 DEDDO75618 318 aa9.66□□□□□ -0.86
LTBR-208ENST00000541005 DEFB131AP59861 70 aa9.66□□□□□ -0.86
LTBR-208ENST00000541005 VAMP2P63027 116 aa9.66□□□□□ -0.86
LTBR-208ENST00000541005 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
LTBR-208ENST00000541005 CYP2G1PQ6ZSU1 146 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms