RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ENSAO43768 121 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 LINC00614P0C842 121 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 RBMXL3Q8N7X1 1067 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 CORO2AQ92828 525 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 NDUFA4L2Q9NRX3 87 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 SPTBN1Q01082 2364 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 H0YJW9 148 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 K7EM74 188 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 SP9P0CG40 484 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 UBE2G1P62253 170 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 RPL19P84098 196 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 RNF151Q2KHN1 245 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 MPV17L2Q567V2 206 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 LYPD2Q6UXB3 125 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 RELQ04864 619 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 CIARTQ8N365 385 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 A0A1W2PPI3 338 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 DLL1O00548 723 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 KLK10O43240 276 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 FSTL3O95633 263 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 FAM120AOSQ5T036 256 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 C1orf162Q8NEQ5 155 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 SARAFQ96BY9 339 aa8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-207ENST00000540998 LOC105371242A0A075B767 164 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 MUC21A0A0G2JKD1 596 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 MUC21A0A140T8X8 626 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 FXYD7P58549 80 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 MUC21Q5SSG8 566 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF788Q6ZQV5 615 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 FAM215AQ9Y5M1 114 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 S4R3C0 116 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 TRAV9-2A0A087WT02 112 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR4C46A6NHA9 309 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 POU2AF1Q16633 256 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 PNKDQ8N490 385 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR8B3Q8NGG8 313 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR1L8Q8NGR8 309 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR10X1Q8NGY0 326 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 CCL17Q92583 94 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 IGHV1-24A0A0C4DH33 117 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 CBY3A6NI87 242 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 GLRXP35754 106 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMEM200BQ69YZ2 307 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 DEFB123Q8N688 67 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
CDC42SE1-207ENST00000540998 CFHR2P36980 270 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 PDPNQ86YL7 162 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 TEX45Q8NA69 505 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 LOXL4Q96JB6 756 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 BET1LQ9NYM9 111 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 COX11Q9Y6N1 276 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 ATRXP46100 2492 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 IGHV2-26A0A0B4J1V2 119 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 hADV38S2A0JD32 116 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 DEFB124Q8NES8 71 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 ADTRPQ96IZ2 230 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 WASHC3Q9Y3C0 194 aa8.31□□□□□ -1.08
CDC42SE1-207ENST00000540998 TCRBV4S1A1TA0A5B7 111 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 APOA2P02652 100 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 C17orf77Q96MU5 243 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR2T8A6NH00 312 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 NUDT3O95989 172 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 RBX1P62877 108 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 MZT1Q08AG7 82 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 KLHDC1Q8N7A1 406 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 FAM222BQ8WU58 562 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 ASCL3Q9NQ33 180 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 A0A087X0K7 114 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 TRAV17A0A0B4J275 112 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 IGLC7A0M8Q6 106 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 VAMP3Q15836 100 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF714Q96N38 554 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
CDC42SE1-207ENST00000540998 IGLV3-9A0A075B6K5 115 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 A0A1B0GXF2 115 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 IGLV2-23P01705 113 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 FAM106CPP0CH98 169 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 ETFRF1Q6IPR1 90 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms