RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TMED4Q7Z7H5 227 aa10.48□□□□□ -0.73
MSRB3-209ENST00000540804 LGI3Q8N145 548 aa10.48□□□□□ -0.73
MSRB3-209ENST00000540804 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
MSRB3-209ENST00000540804 PBDC1Q9BVG4 233 aa10.48□□□□□ -0.73
MSRB3-209ENST00000540804 SHPKQ9UHJ6 478 aa10.48□□□□□ -0.73
MSRB3-209ENST00000540804 ZNF705EA8MWA4 302 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-209ENST00000540804 IGLL5B9A064 214 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 SPP1P10451 314 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 GAMTQ14353 236 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 ETFRF1Q6IPR1 90 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-209ENST00000540804 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 Q6ZTC4 211 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 OR1S1Q8NH92 325 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 BCL7BQ9BQE9 202 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 RABL2AQ9UBK7 228 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-209ENST00000540804 CELA1Q9UNI1 258 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 RABL2BQ9UNT1 228 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 U3KQ87 197 aa10.47□□□□□ -0.73
MSRB3-209ENST00000540804 IGKV3-20P01619 116 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 HLA-DMBP28068 263 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 EIF2B2P49770 351 aaKnown RBP10.46□□□□□ -0.73
MSRB3-209ENST00000540804 FXYD7P58549 80 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 OR2F1Q13607 317 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 PYDC2Q56P42 97 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 GDF5OSQ5U4N7 250 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 RNF125Q96EQ8 232 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 SCGB3A2Q96PL1 93 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 XCL2Q9UBD3 114 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 APLNQ9ULZ1 77 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 V9GYH0 126 aa10.46□□□□□ -0.73
MSRB3-209ENST00000540804 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 ZFP92A6NM28 416 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 H3BMM0 161 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 NOL3O60936 208 aaKnown RBP10.45□□□□□ -0.74
MSRB3-209ENST00000540804 PITX3O75364 302 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 MIFP14174 115 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 AP2S1P53680 142 aaPredicted RBP10.45□□□□□ -0.74
MSRB3-209ENST00000540804 ZNF79Q15937 498 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 NOXA1Q86UR1 476 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 WDR12Q9GZL7 423 aaKnown RBP10.45□□□□□ -0.74
MSRB3-209ENST00000540804 TBC1D24Q9ULP9 559 aa10.45□□□□□ -0.74
MSRB3-209ENST00000540804 PAIP2BQ9ULR5 123 aaKnown RBP10.45□□□□□ -0.74
MSRB3-209ENST00000540804 ANXA3P12429 323 aa10.44□□□□□ -0.74
MSRB3-209ENST00000540804 VAMP1P23763 118 aa10.44□□□□□ -0.74
MSRB3-209ENST00000540804 LYZP61626 148 aa10.44□□□□□ -0.74
MSRB3-209ENST00000540804 TOMM5Q8N4H5 51 aa10.44□□□□□ -0.74
MSRB3-209ENST00000540804 MAGT1Q9H0U3 335 aa10.44□□□□□ -0.74
MSRB3-209ENST00000540804 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 GPX4P36969 197 aaPredicted RBP10.43□□□□□ -0.74
MSRB3-209ENST00000540804 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
MSRB3-209ENST00000540804 TMEM41BQ5BJD5 291 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 SLC35E1Q96K37 410 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 HRH4Q9H3N8 390 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 AGRNO00468 2067 aa10.43□□□□□ -0.74
MSRB3-209ENST00000540804 HERC2O95714 4834 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 DNAH2Q9P225 4427 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 HOXB5P09067 269 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 SRPXP78539 464 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 TMEM128Q5BJH2 165 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 CACFD1Q9UGQ2 172 aa10.42□□□□□ -0.74
MSRB3-209ENST00000540804 CCDC160A6NGH7 325 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 F6UB75 175 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 WRBO00258 174 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 SOCS3O14543 225 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 GATA2P23769 480 aaPredicted RBP10.41□□□□□ -0.74
MSRB3-209ENST00000540804 FAUP35544 74 aaKnown RBP10.41□□□□□ -0.74
MSRB3-209ENST00000540804 TMEM182Q6ZP80 229 aaPredicted RBP10.41□□□□□ -0.74
MSRB3-209ENST00000540804 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
MSRB3-209ENST00000540804 IGHV4-4A0A075B6R2 117 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 IGHV3OR16-12A0A075B7B8 117 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 TRAV10A0A0B4J240 114 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 DUXBA0A1W2PPF3 345 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 PRSS46E5RG02 174 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 H3BP45 60 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 SFT2D2O95562 160 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 NKX2-1P43699 371 aaPredicted RBP10.4□□□□□ -0.74
MSRB3-209ENST00000540804 OR8G2PQ6IF36 304 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 C17orf77Q96MU5 243 aa10.4□□□□□ -0.74
MSRB3-209ENST00000540804 SNRPGP15A8MWD9 76 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 ADAP1O75689 374 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 EMP1P54849 157 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 AP3S2P59780 193 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 RAB11AP62491 216 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 THAP8Q8NA92 274 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 PPP1R14BQ96C90 147 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms