RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TOMM40O96008 361 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 PSG1P11464 419 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 YPEL3P61236 119 aaPredicted RBP12.65□□□□□ -0.38
UBC-208ENST00000540700 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
UBC-208ENST00000540700 BAXQ07812 192 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 FGL1Q08830 312 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 TRGV9Q99603 122 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 SMIM3Q9BZL3 60 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 NPVFQ9HCQ7 196 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 TNFSF18Q9UNG2 199 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 UBE2L5PA0A1B0GUS4 154 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 YIF1AO95070 293 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 SCAF4O95104 1147 aaKnown RBP12.64□□□□□ -0.39
UBC-208ENST00000540700 S100A11P31949 105 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 OR2F1Q13607 317 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 CLINT1Q14677 625 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
UBC-208ENST00000540700 FAM106AQ4KMX7 169 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 MGST2Q99735 147 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 C20orf24Q9BUV8 137 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 TMEM147Q9BVK8 224 aa12.64□□□□□ -0.39
UBC-208ENST00000540700 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
UBC-208ENST00000540700 UQCC1Q9NVA1 299 aa12.63□□□□□ -0.39
UBC-208ENST00000540700 WDR83OSQ9Y284 106 aa12.63□□□□□ -0.39
UBC-208ENST00000540700 IGHV3-49A0A0A0MS15 119 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 RD3LP0DJH9 198 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 FOLR2P14207 255 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 HBG1P69891 147 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 HBG2P69892 147 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 CYP2G1PQ6ZSU1 146 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 ZNF546Q86UE3 836 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 STPG3Q8N7X2 389 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 FBXL17Q9UF56 701 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 MLXQ9UH92 298 aa12.62□□□□□ -0.39
UBC-208ENST00000540700 K7EMT4 169 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 SAP30O75446 220 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 IL4P05112 153 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 CBLN1P23435 193 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 ATP6V1FQ16864 119 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 TEPPQ6URK8 271 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 Q8WTZ3 238 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 SLC45A2Q9UMX9 530 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 U3KQK5 164 aa12.61□□□□□ -0.39
UBC-208ENST00000540700 IGHV3OR16-13A0A075B7E8 117 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 IGHV3-74A0A0B4J1X5 117 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 AGPAT2O15120 278 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 ARPC5O15511 151 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 LINC00869P0C866 280 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
UBC-208ENST00000540700 EGFEM1PQ0D2K5 195 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 BTNL8Q6UX41 500 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 ATP5SQ99766 215 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 NEURL2Q9BR09 285 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
UBC-208ENST00000540700 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 SACSQ9NZJ4 4579 aa12.6□□□□□ -0.39
UBC-208ENST00000540700 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 IGHV7-4-1A0A0J9YVY3 117 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 CXCL2P19875 107 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 FGF7P21781 194 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 BPIFCQ8NFQ6 507 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 RNF125Q96EQ8 232 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 ELOVL1Q9BW60 279 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 WDR61Q9GZS3 305 aaKnown RBP12.59□□□□□ -0.39
UBC-208ENST00000540700 U3KQE9 123 aa12.59□□□□□ -0.39
UBC-208ENST00000540700 SCGB2A1O75556 95 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 IGLV1-51P01701 117 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 CRYBB3P26998 211 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
UBC-208ENST00000540700 LYZP61626 148 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 PRR20EP86478 221 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 PRR20CP86479 221 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 PRR20DP86480 221 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 PRR20BP86481 221 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 PRR20AP86496 221 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 OPCMLQ14982 345 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 MIC13Q5XKP0 118 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 MCRIP2Q9BUT9 160 aaKnown RBP12.58□□□□□ -0.4
UBC-208ENST00000540700 NPCDR1Q9BY65 106 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 SMPXQ9UHP9 88 aa12.58□□□□□ -0.4
UBC-208ENST00000540700 CHEK1O14757 476 aa12.57□□□□□ -0.4
UBC-208ENST00000540700 CAMLGP49069 296 aa12.57□□□□□ -0.4
UBC-208ENST00000540700 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
UBC-208ENST00000540700 PATE2Q6UY27 113 aa12.57□□□□□ -0.4
UBC-208ENST00000540700 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
UBC-208ENST00000540700 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms