RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 Q8N1X5 172 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 UXS1Q8NBZ7 420 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 RNASEH2CQ8TDP1 164 aaKnown RBP6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 TMEM190Q8WZ59 177 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 MLXQ9UH92 298 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 PKD1P98161 4303 aa6.57□□□□□ -1.36
TRAPPC1-202ENST00000540486 K7EMT4 169 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 CCSO14618 274 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGKV1-17P01599 117 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 ELLP55199 621 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 ATP5IP56385 69 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 EWSR1Q01844 656 aaKnown RBP eCLIP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 IL15RAQ13261 267 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 IAH1Q2TAA2 248 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 CD300EQ496F6 205 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 TMEM217Q8N7C4 229 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 ZBTB8BQ8NAP8 495 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 RNF183Q96D59 192 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 MARVELD1Q9BSK0 173 aa6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 MRPL27Q9P0M9 148 aaKnown RBP6.56□□□□□ -1.36
TRAPPC1-202ENST00000540486 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 PRSS46E5RG02 174 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 ZNF207O43670 478 aaKnown RBP6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 MED6O75586 246 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 IFNA4P05014 189 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGLC1P0CG04 106 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 CD81P60033 236 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 TIGITQ495A1 244 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 NOXA1Q86UR1 476 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 ZNF575Q86XF7 245 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 LILRB2Q8N423 598 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 DEFB125Q8N687 156 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 TMEM116Q8NCL8 245 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 OR2K2Q8NGT1 345 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 ENKURQ8TC29 256 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 NPIPB3Q92617 1050 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 SMIM8Q96KF7 97 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 NEURL2Q9BR09 285 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 C20orf24Q9BUV8 137 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 SRD5A3Q9H8P0 318 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 TECRQ9NZ01 308 aaKnown RBP6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 GSKIPQ9P0R6 139 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 UFC1Q9Y3C8 167 aa6.55□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 YIF1AO95070 293 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 MBPP02686 304 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 APOHP02749 345 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 SLC25A4P12235 298 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 BMI1P35226 326 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 GPX4P36969 197 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 RND2P52198 227 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 RELQ04864 619 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 GAMTQ14353 236 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 RBMY1FQ15415 496 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 SPANXN5Q5MJ07 72 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 MARC2Q969Z3 335 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 C2orf50Q96LR7 162 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 CIB3Q96Q77 187 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 SMPXQ9UHP9 88 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 TP53TG1Q9Y2A0 90 aa6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 TRAV30A0A087WSZ9 112 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 TRAV14DV4A0A0A6YYC5 116 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGHV7-4-1A0A0J9YVY3 117 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 C7orf66A4D0T2 115 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 SNRPGP15A8MWD9 76 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 FAM25EA8MYX2 175 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 OR11H12B2RN74 326 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 H3BP45 60 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 CHEK1O14757 476 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 RTL8CO15255 209 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 CCNKO75909 580 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 SIX6O95475 246 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 DEFA1P59665 94 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 DEFA3P59666 94 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 YPEL3P61236 119 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 RAB11AP62491 216 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 BTNL8Q6UX41 500 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 SLC16A13Q7RTY0 426 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
TRAPPC1-202ENST00000540486 IGKV1OR2-108A0A075B7D4 117 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 C5orf51A6NDU8 294 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms