RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 GPR107Q5VW38 600 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 IL22RA2Q969J5 263 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 CLUHP3Q96NS8 147 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM56-RWDD3S4R434 201 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 U3KQ87 197 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 CRYM-AS1A6NIL9 109 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 DISC1C4P0D8 188 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 RTL8CO15255 209 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 NXPH3O95157 252 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 PSG1P11464 419 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM268Q5VZI3 342 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 OR8G2PQ6IF36 304 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 OR51G1Q8NGK1 321 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 RNF125Q96EQ8 232 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 ACY3Q96HD9 319 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 GPR132Q9UNW8 380 aa8.59□□□□□ -1.03
CBX3P4-202ENST00000540428 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 IFNA21P01568 189 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 SULT1A3P0DMM9 295 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 SULT1A4P0DMN0 295 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 ID1P41134 155 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 ATP5IP56385 69 aaPredicted RBP8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 CTF1Q16619 201 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 SPATA31B1PQ5VZV4 182 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 SAV1Q9H4B6 383 aaPredicted RBP8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 RFNGQ9Y644 331 aa8.58□□□□□ -1.04
CBX3P4-202ENST00000540428 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 IFNA10P01566 189 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 PSMB3P49720 205 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 KLF9Q13886 244 aaPredicted RBP8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 OXA1LQ15070 435 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 FAAP20Q6NZ36 180 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 SMIM4Q8WVI0 70 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 PRRT1Q99946 306 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 KCNIP3Q9Y2W7 256 aa8.57□□□□□ -1.04
CBX3P4-202ENST00000540428 M0R2N4 97 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 SOCS3O14543 225 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 AKAIN1P0CW23 69 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 GPX4P36969 197 aaPredicted RBP8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 CCR6P51684 374 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 EMP1P54849 157 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 SUPT4H1P63272 117 aaKnown RBP8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 ZNF79Q15937 498 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 RNF212Q495C1 297 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 GDF5OSQ5U4N7 250 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 SAMD13Q5VXD3 122 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 Q6ZR54 194 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 LGI3Q8N145 548 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 ZNF709Q8N972 641 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 DTD1Q8TEA8 209 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 PBDC1Q9BVG4 233 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 NAA50Q9GZZ1 169 aaKnown RBP8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 MIXL1Q9H2W2 232 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 RABL2AQ9UBK7 228 aaPredicted RBP8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 HSPB7Q9UBY9 170 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
CBX3P4-202ENST00000540428 A0A0B4J2A0 478 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 ZFP92A6NM28 416 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 CTDSPLO15194 276 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 FABP1P07148 127 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 PAX9P55771 341 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 SMCO1Q147U7 214 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 OR4C16Q8NGL9 310 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 COQ8AQ8NI60 647 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 SCGB3A2Q96PL1 93 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 WDR12Q9GZL7 423 aaKnown RBP8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 SHPKQ9UHJ6 478 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 GOLT1BQ9Y3E0 138 aa8.55□□□□□ -1.04
CBX3P4-202ENST00000540428 PKHD1P08F94 4074 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 IGKV1D-37A0A075B6S9 117 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 IGHV3OR16-12A0A075B7B8 117 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 PIGBOS1A0A0B4J2F0 54 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 ISLRO14498 428 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 RGS5O15539 181 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 HBE1P02100 147 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 FXYD7P58549 80 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 PSG9Q00887 426 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 GAMTQ14353 236 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 EBLN2Q6P2I7 272 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 OR4B1Q8NGF8 309 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 OR51S1Q8NGJ8 323 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 SLC35E1Q96K37 410 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 RBKSQ9H477 322 aa8.54□□□□□ -1.04
CBX3P4-202ENST00000540428 CTDSP2O14595 271 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 MEOX2P50222 304 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 DEFB1P60022 68 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms