RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ZBTB8BQ8NAP8 495 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 TMEM231Q9H6L2 316 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 A0A1W2PS18 150 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 H2AFB2P0C5Z0 115 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 RPL35AP18077 110 aaKnown RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 ZNF846Q147U1 533 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 ZNF431Q8TF32 576 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 PSENENQ9NZ42 101 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 RABAC1Q9UI14 185 aa11.14□□□□□ -0.63
UBE3B-212ENST00000540230 RCL1Q9Y2P8 373 aaKnown RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
UBE3B-212ENST00000540230 RYR3Q15413 4870 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 DYNC2H1Q8NCM8 4307 aaKnown RBP11.13□□□□□ -0.63
UBE3B-212ENST00000540230 PMS2P5A8MQ11 134 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 DNASE2O00115 360 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-212ENST00000540230 CD5P06127 495 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 OR2F1Q13607 317 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 ACOT7LQ6ZUV0 252 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 STXBP6Q8NFX7 210 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 PBDC1Q9BVG4 233 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 GSKIPQ9P0R6 139 aa11.13□□□□□ -0.63
UBE3B-212ENST00000540230 K7EQG2 157 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 BUB3O43684 328 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 DEFB131AP59861 70 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 RPP30P78346 268 aaKnown RBP11.12□□□□□ -0.63
UBE3B-212ENST00000540230 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 DCANP1Q8TF63 244 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 NARS2Q96I59 477 aaKnown RBP11.12□□□□□ -0.63
UBE3B-212ENST00000540230 TRGV9Q99603 122 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 SACSQ9NZJ4 4579 aa11.12□□□□□ -0.63
UBE3B-212ENST00000540230 AGRNO00468 2067 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 MBPP02686 304 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-212ENST00000540230 LYZP61626 148 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 MZT2BQ6NZ67 158 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 TMEM182Q6ZP80 229 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-212ENST00000540230 C12orf45Q8N5I9 185 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-212ENST00000540230 SMIM8Q96KF7 97 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
UBE3B-212ENST00000540230 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 GATA2P23769 480 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-212ENST00000540230 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 GRAMD2BQ96HH9 432 aa11.1□□□□□ -0.63
UBE3B-212ENST00000540230 C7orf66A4D0T2 115 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
UBE3B-212ENST00000540230 APOC4P55056 127 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-212ENST00000540230 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-212ENST00000540230 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 CASC10Q5T4H9 136 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 NRARPQ7Z6K4 114 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 RAB40CQ96S21 281 aa11.09□□□□□ -0.63
UBE3B-212ENST00000540230 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 SMCO3A2RU48 225 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 HELTA6NFD8 242 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 SNRPGP15A8MWD9 76 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 K7EPK0 472 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 IL5P05113 134 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 SIGLEC15Q6ZMC9 328 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 TMEM144Q7Z5S9 345 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 KIR2DL5BQ8NHK3 375 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 LYSTQ99698 3801 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 C11orf1Q9H5F2 150 aa11.08□□□□□ -0.64
UBE3B-212ENST00000540230 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
UBE3B-212ENST00000540230 TSC22D2O75157 780 aa11.07□□□□□ -0.64
UBE3B-212ENST00000540230 TAS2R30P59541 319 aa11.07□□□□□ -0.64
UBE3B-212ENST00000540230 Q6ZWC4 215 aa11.07□□□□□ -0.64
UBE3B-212ENST00000540230 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 FABP1P07148 127 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 LYL1P12980 280 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 DLK1P80370 383 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 IL15RAQ13261 267 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 NRN1Q9NPD7 142 aa11.06□□□□□ -0.64
UBE3B-212ENST00000540230 PLECQ15149 4684 aaKnown RBP11.06□□□□□ -0.64
UBE3B-212ENST00000540230 UBE2CO00762 179 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 SPRY2O43597 315 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 AP2S1P53680 142 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms