RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ID1P41134 155 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 KLF9Q13886 244 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-211ENST00000539843 SPCS2Q15005 226 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 USF2Q15853 346 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-211ENST00000539843 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 ANKRD20A5PA0PJZ0 165 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 AP3S2P59780 193 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 RAB11AP62491 216 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 HSPB7Q9UBY9 170 aa11.11□□□□□ -0.63
UBE3B-211ENST00000539843 BUB3O43684 328 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 PSG1P11464 419 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 S100A7P31151 101 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-211ENST00000539843 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-211ENST00000539843 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 TMBIM6P55061 237 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 RPP30P78346 268 aaKnown RBP11.1□□□□□ -0.63
UBE3B-211ENST00000539843 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
UBE3B-211ENST00000539843 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 GIG44P09565 113 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-211ENST00000539843 RBMY1A1P0DJD3 496 aaKnown RBP11.09□□□□□ -0.63
UBE3B-211ENST00000539843 RBMY1CP0DJD4 496 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 RBMY1FQ15415 496 aaKnown RBP11.09□□□□□ -0.63
UBE3B-211ENST00000539843 Q6ZTC4 211 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 RBKSQ9H477 322 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 PAIP2BQ9ULR5 123 aaKnown RBP11.09□□□□□ -0.63
UBE3B-211ENST00000539843 APLNQ9ULZ1 77 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 X6R8D5 127 aa11.09□□□□□ -0.63
UBE3B-211ENST00000539843 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 TEX48A0A1B0GUV7 120 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 SNRPGP15A8MWD9 76 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 MED6O75586 246 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 CFDP00746 253 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-211ENST00000539843 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 LYZP61626 148 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
UBE3B-211ENST00000539843 H3BMM0 161 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
UBE3B-211ENST00000539843 C1orf194Q5T5A4 169 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 SPATA31B1PQ5VZV4 182 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 MCFD2Q8NI22 146 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 CIB3Q96Q77 187 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-211ENST00000539843 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
UBE3B-211ENST00000539843 ELOA3CA0A087WX78 387 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-211ENST00000539843 DEFB131BA0A096LNP1 70 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 SMIM9A6NGZ8 99 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 VAMP1P23763 118 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 PSMB3P49720 205 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 TMEM128Q5BJH2 165 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 TOMM5Q8N4H5 51 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
UBE3B-211ENST00000539843 AMBPP02760 352 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 P0DMU3 169 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 S100A5P33763 92 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 MEOX2P50222 304 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 GAMTQ14353 236 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 PYDC2Q56P42 97 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 DEDD2Q8WXF8 326 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 NEU1Q99519 415 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 TRGV9Q99603 122 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 GOLT1BQ9Y3E0 138 aa11.05□□□□□ -0.64
UBE3B-211ENST00000539843 IGHV3OR16-12A0A075B7B8 117 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 SLC25A6P12236 298 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 TNFSF8P32971 234 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 GALR1P47211 349 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 OR4B1Q8NGF8 309 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 SLC25A21Q9BQT8 299 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-211ENST00000539843 C7orf50Q9BRJ6 194 aaKnown RBP11.04□□□□□ -0.64
UBE3B-211ENST00000539843 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-211ENST00000539843 TMED3Q9Y3Q3 217 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
UBE3B-211ENST00000539843 ISLRO14498 428 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 IAPPP10997 89 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 PRR20EP86478 221 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 PRR20CP86479 221 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 PRR20DP86480 221 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms