RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 IGHV3-23P01764 117 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 PYYP10082 97 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 FAM110DQ8TAY7 271 aaPredicted RBP17.62■□□□□ 0.41
HOMER3-204ENST00000539827 PRELID1Q9Y255 219 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 PTPN13Q12923 2485 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 G3V318 75 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 IGHV4-31P0DP07 118 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 MFAP4P55083 255 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 Q96MF0 132 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 PAXXQ9BUH6 204 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 MDFIC2A0A1B0GVS7 189 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 AMY1AP04745 511 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 UBE2L3P68036 154 aaKnown RBP17.61■□□□□ 0.41
HOMER3-204ENST00000539827 PNRC1Q12796 327 aaPredicted RBP17.61■□□□□ 0.41
HOMER3-204ENST00000539827 HIST1H2BAQ96A08 127 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 PSMG3-AS1Q96PY0 264 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 DERL1Q9BUN8 251 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 FBXL7Q9UJT9 491 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.61■□□□□ 0.413e-6■■■□□ 16.1
HOMER3-204ENST00000539827 DOPEY2Q9Y3R5 2298 aa17.61■□□□□ 0.41
HOMER3-204ENST00000539827 GNG7O60262 68 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 RD3LP0DJH9 198 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 PLP1P60201 277 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 ADIRFQ15847 76 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 Q56UQ5 140 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 C9orf152Q5JTZ5 239 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 C16orf82Q7Z2V1 217 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 OR51M1Q9H341 326 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 THYN1Q9P016 225 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 CELSR2Q9HCU4 2923 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 A6NDX4 124 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 C21orf62Q9NYP8 219 aa17.6■□□□□ 0.41
HOMER3-204ENST00000539827 CR1P17927 2039 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 C1orf196B1AJZ1 125 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 J3QLI3 93 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 OR2C1O95371 312 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 SNRPCP09234 159 aaKnown RBP17.59■□□□□ 0.41
HOMER3-204ENST00000539827 RPL23P62829 140 aaKnown RBP17.59■□□□□ 0.41
HOMER3-204ENST00000539827 BCL6BQ8N143 479 aaPredicted RBP17.59■□□□□ 0.41
HOMER3-204ENST00000539827 SAV1Q9H4B6 383 aaPredicted RBP17.59■□□□□ 0.41
HOMER3-204ENST00000539827 HIGD1AQ9Y241 93 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 A0A087WWC5 75 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 F8W735 103 aaPredicted RBP17.59■□□□□ 0.41
HOMER3-204ENST00000539827 KRTAP1-3Q8IUG1 177 aa17.59■□□□□ 0.41
HOMER3-204ENST00000539827 B4DEV8 164 aa17.58■□□□□ 0.4
HOMER3-204ENST00000539827 FABP1P07148 127 aa17.58■□□□□ 0.4
HOMER3-204ENST00000539827 LEMD1Q68G75 181 aa17.58■□□□□ 0.4
HOMER3-204ENST00000539827 ARL2-SNX15V9GYD0 113 aa17.58■□□□□ 0.4
HOMER3-204ENST00000539827 CSMD2Q7Z408 3487 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 TOMM40O96008 361 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 HIST1H1BP16401 226 aaKnown RBP17.57■□□□□ 0.4
HOMER3-204ENST00000539827 LINC00527Q9UJ94 153 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 TRAV30A0A087WSZ9 112 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 FXYD5Q96DB9 178 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 MBD6Q96DN6 1003 aa17.57■□□□□ 0.4
HOMER3-204ENST00000539827 CSMD1Q96PZ7 3565 aa17.56■□□□□ 0.4
HOMER3-204ENST00000539827 GGTLC3B5MD39 225 aa17.56■□□□□ 0.4
HOMER3-204ENST00000539827 SUMO1P63165 101 aaKnown RBP17.56■□□□□ 0.4
HOMER3-204ENST00000539827 DEFB112Q30KQ8 113 aa17.56■□□□□ 0.4
HOMER3-204ENST00000539827 FAM24BQ8N5W8 94 aa17.56■□□□□ 0.4
HOMER3-204ENST00000539827 ZNF48Q96MX3 618 aaPredicted RBP17.56■□□□□ 0.4
HOMER3-204ENST00000539827 CENPEQ02224 2701 aa17.56■□□□□ 0.4
HOMER3-204ENST00000539827 OR2T8A6NH00 312 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 TMEM68Q96MH6 324 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 MS4A10Q96PG2 267 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 AURKAIP1Q9NWT8 199 aaPredicted RBP17.55■□□□□ 0.4
HOMER3-204ENST00000539827 MRPL27Q9P0M9 148 aaKnown RBP17.55■□□□□ 0.4
HOMER3-204ENST00000539827 ABCA12Q86UK0 2595 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 A0A1W2PRE2 83 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 CRYBB3P26998 211 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 RHOGP84095 191 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 C11orf52Q96A22 123 aa17.55■□□□□ 0.4
HOMER3-204ENST00000539827 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
HOMER3-204ENST00000539827 PGPEP1LA6NFU8 196 aa17.54■□□□□ 0.4
HOMER3-204ENST00000539827 IL4P05112 153 aa17.54■□□□□ 0.4
HOMER3-204ENST00000539827 RAB5AP20339 215 aa17.54■□□□□ 0.4
HOMER3-204ENST00000539827 YPEL3P61236 119 aaPredicted RBP17.54■□□□□ 0.4
HOMER3-204ENST00000539827 ZNF491Q8N8L2 437 aa17.54■□□□□ 0.4
HOMER3-204ENST00000539827 MAP1AP78559 2803 aaPredicted RBP17.54■□□□□ 0.4
HOMER3-204ENST00000539827 TRAV41A0A0B4J266 112 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 C15orf32Q32M92 178 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 ZNF343Q6P1L6 599 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 VN1R17PQ8TDU5 208 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 BLNKQ8WV28 456 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 WI2-2373I1.2A0A1W2PRP0 233 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 CXorf65A6NEN9 183 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 KLK9Q2XQG4 91 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 PRSS57Q6UWY2 283 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 STXBP6Q8NFX7 210 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 RNF125Q96EQ8 232 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 KLK9Q9UKQ9 250 aa17.53■□□□□ 0.4
HOMER3-204ENST00000539827 TRBV20OR9-2A0A075B6H5 130 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 TRBV9A0A0B4J1U6 114 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 Q8WTZ3 238 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 YPEL4Q96NS1 127 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 ELOVL1Q9BW60 279 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 PITPNC1Q9UKF7 332 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 URGCP-MRPS24S4R325 110 aa17.52■□□□□ 0.4
HOMER3-204ENST00000539827 H3BTX0 84 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 GP9P14770 177 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms