RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IGHV2-26A0A0B4J1V2 119 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 PGPA6NDG6 321 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 SIAH2O43255 324 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 G0S2P27469 103 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 AMTP48728 403 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 TCF24Q7RTU0 167 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 SPACA3Q8IXA5 215 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
UBE3B-210ENST00000539599 A6NNC1 897 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 M0QZ24 198 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 SLC25A5P05141 298 aaKnown RBP11.24□□□□□ -0.61
UBE3B-210ENST00000539599 TAS2R60P59551 318 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 GNB1LQ9BYB4 327 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 JKAMPQ9P055 326 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 A0A1W2PS18 150 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 TMEM68Q96MH6 324 aa11.24□□□□□ -0.61
UBE3B-210ENST00000539599 BATFQ16520 125 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 NUP35Q8NFH5 326 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 VSTM2AQ8TAG5 236 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
UBE3B-210ENST00000539599 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
UBE3B-210ENST00000539599 TBR1Q16650 682 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-210ENST00000539599 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
UBE3B-210ENST00000539599 AMY1AP04745 511 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 GPX1P07203 203 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 LYZP61626 148 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 LCN12Q6JVE5 192 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 PNKDQ8N490 385 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 Q8N976 141 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 NEU1Q99519 415 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 C2orf88Q9BSF0 95 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 INSIG2Q9Y5U4 225 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 SH2D7A6NKC9 451 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-210ENST00000539599 BPIFB3P59826 476 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 PMCHL1Q16048 86 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 ASCL5Q7RTU5 278 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-210ENST00000539599 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 APCSP02743 223 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 KLRD1Q13241 179 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 SCNM1Q9BWG6 230 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 CHODLQ9H9P2 273 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
UBE3B-210ENST00000539599 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBE3B-210ENST00000539599 Q0VG73 95 aa11.21□□□□□ -0.61
UBE3B-210ENST00000539599 TMEM30BQ3MIR4 351 aa11.21□□□□□ -0.61
UBE3B-210ENST00000539599 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
UBE3B-210ENST00000539599 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
UBE3B-210ENST00000539599 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
UBE3B-210ENST00000539599 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.62
UBE3B-210ENST00000539599 SSTP61278 116 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 LINC00311Q8N616 119 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 C19orf24Q9BVV8 132 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 ZNF835Q9Y2P0 537 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.62
UBE3B-210ENST00000539599 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 BRS3P32247 399 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 ZNF137PP52743 207 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 UBE2G1P62253 170 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 PLGLAQ15195 96 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-210ENST00000539599 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 BUB1B-PAK6H3BSN5 160 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 IGLV1-47P01700 117 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 RBP4P02753 201 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 PSG1P11464 419 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 PAFAH1B2P68402 229 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 NIT1Q86X76 327 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 ZNF596Q8TC21 504 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 C7orf69Q9H7B7 122 aa11.2□□□□□ -0.62
UBE3B-210ENST00000539599 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
UBE3B-210ENST00000539599 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
UBE3B-210ENST00000539599 ESDP10768 282 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms