RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 PSG1P11464 419 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 IL7P13232 177 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 DEFB131AP59861 70 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 GAMTQ14353 236 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 USF2Q15853 346 aaPredicted RBP8.51□□□□□ -1.05
RTN3-209ENST00000538995 ZNF124Q15973 351 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 GGNBP1Q5YKI7 109 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 OR8G2PQ6IF36 304 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 C16orf54Q6UWD8 224 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 TMEM217Q8N7C4 229 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 OR51G1Q8NGK1 321 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 COQ8AQ8NI60 647 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 RNF125Q96EQ8 232 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
RTN3-209ENST00000538995 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
RTN3-209ENST00000538995 ZFP92A6NM28 416 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 BUB3O43684 328 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 HOXB5P09067 269 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 IAPPP10997 89 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 BTCP35070 178 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 DHRS2Q13268 280 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 LYG2Q86SG7 212 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 FAM24BQ8N5W8 94 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 TRGV9Q99603 122 aa8.5□□□□□ -1.05
RTN3-209ENST00000538995 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 IFNA21P01568 189 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 OR4E1P0C645 316 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 LEMD1Q68G75 181 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 SIGLEC15Q6ZMC9 328 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 STHQ8IWL8 128 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 THAP8Q8NA92 274 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 NRN1Q9NPD7 142 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 FLVCR2Q9UPI3 526 aa8.49□□□□□ -1.05
RTN3-209ENST00000538995 PRSS46E5RG02 174 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 ADAP1O75689 374 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 JTBO76095 146 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 CA1P00915 261 aaPredicted RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 ZNF688P0C7X2 276 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 SPP1P10451 314 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 SNRPD3P62318 126 aaKnown RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 ID3Q02535 119 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 C4orf46Q504U0 113 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 C1orf194Q5T5A4 169 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 MORN3Q6PF18 240 aaPredicted RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 LINC00299Q6ZSB3 139 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 MAGT1Q9H0U3 335 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 PAIP2BQ9ULR5 123 aaKnown RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 STRAPQ9Y3F4 350 aaKnown RBP8.48□□□□□ -1.05
RTN3-209ENST00000538995 ALMS1Q8TCU4 4167 aa8.48□□□□□ -1.05
RTN3-209ENST00000538995 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
RTN3-209ENST00000538995 LINC00854A0A1B0GVQ3 168 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 SNRPGP15A8MWD9 76 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 WRBO00258 174 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 ANXA7P20073 488 aaKnown RBP8.47□□□□□ -1.05
RTN3-209ENST00000538995 NKX2-1P43699 371 aaPredicted RBP8.47□□□□□ -1.05
RTN3-209ENST00000538995 ZNF90Q03938 601 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 RARRES2Q99969 163 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 CCDC32Q9BV29 185 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 PBDC1Q9BVG4 233 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 FBXL17Q9UF56 701 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 SLC45A2Q9UMX9 530 aa8.47□□□□□ -1.05
RTN3-209ENST00000538995 IGKV1OR2-108A0A075B7D4 117 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 CXorf65A6NEN9 183 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 LYRM1O43325 122 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 LYZP61626 148 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 PSMG4Q5JS54 123 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 SPANXN5Q5MJ07 72 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 MITD1Q8WV92 249 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 C20orf85Q9H1P6 137 aa8.46□□□□□ -1.06
RTN3-209ENST00000538995 H3BP45 60 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 PLA2G10O15496 165 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 S100A7P31151 101 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 POLR2GP62487 172 aaKnown RBP eCLIP8.45□□□□□ -1.06
RTN3-209ENST00000538995 EWSR1Q01844 656 aaKnown RBP eCLIP8.45□□□□□ -1.06
RTN3-209ENST00000538995 AKR1C1Q04828 323 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 ACTL10Q5JWF8 245 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 OR11H2Q8NH07 326 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 SMIM8Q96KF7 97 aa8.45□□□□□ -1.06
RTN3-209ENST00000538995 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 KNCNA6PVL3 124 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 FNDC10F2Z333 226 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 SSSCA1O60232 199 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 GIG44P09565 113 aaPredicted RBP8.44□□□□□ -1.06
RTN3-209ENST00000538995 TAS2R30P59541 319 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 OR2F1Q13607 317 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 PMS2P11Q13670 270 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 IAH1Q2TAA2 248 aaPredicted RBP8.44□□□□□ -1.06
RTN3-209ENST00000538995 TMEM144Q7Z5S9 345 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 BPIFCQ8NFQ6 507 aa8.44□□□□□ -1.06
RTN3-209ENST00000538995 PPP1R14BQ96C90 147 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms