RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 ETFRF1Q6IPR1 90 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 C16orf82Q7Z2V1 217 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
ACTN1-205ENST00000538545 C15orf54Q8N8G6 183 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 MS4A10Q96PG2 267 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 RASL11BQ9BPW5 248 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 CR1P17927 2039 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 NDUFS8O00217 210 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 BRS3P32247 399 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 YPEL4Q96NS1 127 aa11.1□□□□□ -0.63
ACTN1-205ENST00000538545 OOSP1A8MZH6 123 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 Q6ZS46 218 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 NANPQ8TBE9 248 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 CLN5O75503 358 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 RAB5AP20339 215 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
ACTN1-205ENST00000538545 TMEM249Q2WGJ8 235 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 TRGV9Q99603 122 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-205ENST00000538545 NF1P21359 2839 aa11.09□□□□□ -0.63
ACTN1-205ENST00000538545 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.63
ACTN1-205ENST00000538545 F8W735 103 aaPredicted RBP11.08□□□□□ -0.63
ACTN1-205ENST00000538545 PDE6DO43924 150 aa11.08□□□□□ -0.63
ACTN1-205ENST00000538545 AMY1AP04745 511 aa11.08□□□□□ -0.63
ACTN1-205ENST00000538545 RPS10P46783 165 aaKnown RBP11.08□□□□□ -0.63
ACTN1-205ENST00000538545 GNG5P63218 68 aa11.08□□□□□ -0.63
ACTN1-205ENST00000538545 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 CORTO00230 105 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
ACTN1-205ENST00000538545 OR5I1Q13606 314 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 PQLC2Q6ZP29 291 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 TRAV34A0A0B4J273 112 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 H3BUX3 64 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 TAS2R45P59539 299 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 BPIFB3P59826 476 aa11.08□□□□□ -0.64
ACTN1-205ENST00000538545 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-205ENST00000538545 TGFAP01135 160 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 SELENOTP62341 195 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 Q56UQ5 140 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 K7EN84 100 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 GNG7O60262 68 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 HYPMO75409 117 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 IL4P05112 153 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-205ENST00000538545 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 PFDN5Q99471 154 aa11.07□□□□□ -0.64
ACTN1-205ENST00000538545 FAM3BP58499 235 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 TTC9CQ8N5M4 171 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 ASCL2Q99929 193 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 CHRDL1Q9BU40 450 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 A0A087WWC5 75 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 A0A096LNT2 108 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 B4DSR2 109 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 GOSR1O95249 250 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 HLA-DRB1P01911 266 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 BLCAPP62952 87 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 USF2Q15853 346 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 C1RLQ9NZP8 487 aa11.06□□□□□ -0.64
ACTN1-205ENST00000538545 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-205ENST00000538545 CLDN34H7C241 214 aa11.05□□□□□ -0.64
ACTN1-205ENST00000538545 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
ACTN1-205ENST00000538545 MTORP42345 2549 aa11.05□□□□□ -0.64
ACTN1-205ENST00000538545 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-205ENST00000538545 PDZD2O15018 2839 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 F6UZH7 168 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 SLC17A3O00476 420 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 SGMS2Q8NHU3 365 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 HIGD1AQ9Y241 93 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 A0A1W2PPQ1 181 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 H7BYZ3 331 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 GPR183P32249 361 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 SMUG1Q53HV7 270 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms