RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 WRBO00258 174 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 BUB3O43684 328 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 IFNA21P01568 189 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 ZNF124Q15973 351 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 C4orf46Q504U0 113 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 STPG3Q8N7X2 389 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 DYNC2H1Q8NCM8 4307 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-205ENST00000537164 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 HELTA6NFD8 242 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 TCRBP04435 133 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 AP2S1P53680 142 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 FAM24BQ8N5W8 94 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 RNF183Q96D59 192 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 RNF125Q96EQ8 232 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 TRGV9Q99603 122 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
SFSWAP-205ENST00000537164 SPRY2O43597 315 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 FABP1P07148 127 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 NKX2-1P43699 371 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 ZNF90Q03938 601 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 STXBP6Q8NFX7 210 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 IL17DQ8TAD2 202 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 CSTL1Q9H114 145 aa12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-205ENST00000537164 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 DEFB131AP59861 70 aa12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 POLR2GP62487 172 aaKnown RBP eCLIP12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 DEFB135Q30KP9 77 aa12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 SPANXN5Q5MJ07 72 aa12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 SEPSECSQ9HD40 501 aaKnown RBP12.65□□□□□ -0.38
SFSWAP-205ENST00000537164 SNRPGP15A8MWD9 76 aa12.64□□□□□ -0.39
SFSWAP-205ENST00000537164 PAX9P55771 341 aa12.64□□□□□ -0.39
SFSWAP-205ENST00000537164 PFDN2Q9UHV9 154 aa12.64□□□□□ -0.39
SFSWAP-205ENST00000537164 AGRNO00468 2067 aa12.64□□□□□ -0.39
SFSWAP-205ENST00000537164 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 H3BP45 60 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 CFDP00746 253 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 TAS2R30P59541 319 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 IAH1Q2TAA2 248 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 ZFAND6Q6FIF0 208 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 ZBTB8BQ8NAP8 495 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 GATAD1Q8WUU5 269 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 NRN1Q9NPD7 142 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 TBC1D24Q9ULP9 559 aa12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-205ENST00000537164 ASAH1Q13510 395 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 C1orf194Q5T5A4 169 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 LEMD1Q68G75 181 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 RAB40CQ96S21 281 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 PTTG2Q9NZH5 202 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 SLC45A2Q9UMX9 530 aa12.62□□□□□ -0.39
SFSWAP-205ENST00000537164 TRAV6A0A075B6T7 132 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 FNDC10F2Z333 226 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 SSSCA1O60232 199 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 ACOT7LQ6ZUV0 252 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 TMEM144Q7Z5S9 345 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 RCL1Q9Y2P8 373 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-205ENST00000537164 TSC22D2O75157 780 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 H2AFB2P0C5Z0 115 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 LYZP61626 148 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 STHQ8IWL8 128 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 FBXL17Q9UF56 701 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 SACSQ9NZJ4 4579 aa12.6□□□□□ -0.39
SFSWAP-205ENST00000537164 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
SFSWAP-205ENST00000537164 MBPP02686 304 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-205ENST00000537164 OR2F1Q13607 317 aa12.59□□□□□ -0.39
SFSWAP-205ENST00000537164 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
SFSWAP-205ENST00000537164 SEC22CQ9BRL7 303 aa12.59□□□□□ -0.39
SFSWAP-205ENST00000537164 A0A0J9YWU9 116 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 C7orf66A4D0T2 115 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 UPK1BO75841 260 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 GIG44P09565 113 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 SPP1P10451 314 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 DLK1P80370 383 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 ZNF846Q147U1 533 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 TMEM41BQ5BJD5 291 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 BPIFCQ8NFQ6 507 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms