RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MALRD1Q5VYJ5 2156 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 PGPA6NDG6 321 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 EREGO14944 169 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 MOSP00540 346 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 AMTP48728 403 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 PLP1P60201 277 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 PPP1R27Q86WC6 154 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 C8orf46Q8TAG6 207 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 GPR82Q96P67 336 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 MIEN1Q9BRT3 115 aa12.83□□□□□ -0.36
CHMP1A-202ENST00000535997 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 SLC25A5P05141 298 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 CD3EP07766 207 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 FOSL1P15407 271 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 RBPJQ06330 500 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 BLNKQ8WV28 456 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 RCHY1Q96PM5 261 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 FAM103A1Q9BTL3 118 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 VAMP8Q9BV40 100 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 C7orf69Q9H7B7 122 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 FBXL7Q9UJT9 491 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 SLAQ13239 276 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 VKORC1Q9BQB6 163 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 MRPL27Q9P0M9 148 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-202ENST00000535997 RBP4P02753 201 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 CNTFRP26992 372 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 NBL1P41271 181 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 CA7P43166 264 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 ZNF841Q6ZN19 808 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 TMEM68Q96MH6 324 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 MLST8Q9BVC4 326 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 F11RQ9Y624 299 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 M0QZK8 103 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 KRTDAPP60985 99 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 GNG5P63218 68 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 PRR27Q6MZM9 219 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 ATP5L2Q7Z4Y8 100 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 RNF5Q99942 180 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 ATG101Q9BSB4 218 aa12.81□□□□□ -0.36
CHMP1A-202ENST00000535997 ABCA1O95477 2261 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 HIGD1CA8MV81 97 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 SPACA3Q8IXA5 215 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 C18orf32Q8TCD1 76 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 PAM16Q9Y3D7 125 aa12.8□□□□□ -0.36
CHMP1A-202ENST00000535997 GP9P14770 177 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 C19orf35Q6ZS72 473 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 OR4B1Q8NGF8 309 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 NEU1Q99519 415 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 TOMM40O96008 361 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 APELAP0DMC3 54 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 Q8N976 141 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
CHMP1A-202ENST00000535997 TPRP12270 2363 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 PPIAL4CA0A0B4J2A2 164 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 FAM87AP0C7U9 286 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 PPIAL4GP0DN37 164 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 PMCHP20382 165 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 RPEQ96AT9 228 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 TCAPO15273 167 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 OR2J3O76001 311 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 LTAP01374 205 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 DLX1P56177 255 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 CT83Q5H943 113 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 NIT1Q86X76 327 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
CHMP1A-202ENST00000535997 SPTBN2O15020 2390 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 IGHV3-21A0A0B4J1V1 117 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 A8MWL6 223 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 LYNX1G3V0Z9 82 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 TCRAP04437 139 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 LYNX1P0DP58 116 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 LHFPL4Q7Z7J7 247 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 MUC15Q8N387 334 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 SRSF12Q8WXF0 261 aaKnown RBP12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 SRSF8Q9BRL6 282 aaKnown RBP12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 Q9H3A6 140 aa12.77□□□□□ -0.36
CHMP1A-202ENST00000535997 IGLC1P0CG04 106 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 PSG1P11464 419 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 BORCS7Q96B45 105 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms